Gene Slin_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4182 
Symbol 
ID8727941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5041237 
End bp5042100 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content53% 
IMG OID 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_003388967 
Protein GI284039037 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.270615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.798779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA AAGCCGTTAT CCCCGCTGCC GGACTTGGAA CCCGGTTTTT GCCCGCCACC 
AAGGCTCAGC CGAAAGAAAT GCTCCCGATT ATCGACCGCC CCACGATTCA GTACGTCGTG
CAGGAAGCCG TCGATTCGGG TATTGAAGAC ATCCTTATCA TTACGGGTAA AGGCAAGCGG
GCCATCGAAG ACCACTTCGA CCGCAACTAC GAACTCGAAA TGCGGCTCGA AGAAAAGGAA
GACCAGTTAC TACTCGACGA GATGCGTCGT CTGTCAGACA TGGCGAACCT GCACTACGTA
CGTCAGCGGG AACTGAACGG CCTGGGCGAT GCCATTCGCT ACGCCCGCCA CCATGTGGGT
AATGAACCCT TTGCTGTGCT CCTTGGCGAT ACTATCATGG ATTCGGTGAT TCCGGTTACC
CAGCAGCTTA TTGATACTTA TGCGCAGTTC GGCGGTTCGG TCATTGCTGT AGAGGAAGTC
CCCCACGATA AGGTGAACCG GTACGGTATT GTAGGCGGTA AATCGCTGGG CGACCGGATT
TTTGAACTCG ATACGCTGGT CGAAAAGCCG TCGGTCAACG AAGCCCCGTC GAATCTGGCC
ATCGCCGGTC GCTACATCCT AACCCCCGAG ATTTTTGCCA TGCTGGAACA AACGCCGGTT
GGTAAAAACA ACGAAATTCA GCTGACAGAT GCCATGCTGC TGTTGCTGAA GCGGGAGAAC
TTGTACGCGC ACCGCATAGA AGGCAAACGG CACGACATTG GCAATAAACT CGATTTCCTG
AAAACAACCG TCGAGTTTGC CCTCAAGCGC CCCGAGTTCG CTGACAAGTT TCGGGCATTC
CTCGAAGAAA TTGTGAAGAA GTAA
 
Protein sequence
MIKKAVIPAA GLGTRFLPAT KAQPKEMLPI IDRPTIQYVV QEAVDSGIED ILIITGKGKR 
AIEDHFDRNY ELEMRLEEKE DQLLLDEMRR LSDMANLHYV RQRELNGLGD AIRYARHHVG
NEPFAVLLGD TIMDSVIPVT QQLIDTYAQF GGSVIAVEEV PHDKVNRYGI VGGKSLGDRI
FELDTLVEKP SVNEAPSNLA IAGRYILTPE IFAMLEQTPV GKNNEIQLTD AMLLLLKREN
LYAHRIEGKR HDIGNKLDFL KTTVEFALKR PEFADKFRAF LEEIVKK