| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4180 |
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| Symbol | |
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| ID | 8727939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5032765 |
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| End bp | 5035737 |
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| Gene Length | 2973 bp |
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| Protein Length | 990 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003388965 |
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| Protein GI | 284039035 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.245505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTC CTTTCCGATG GATTGGGGTT ATTGTCTTAC AACTTTTCTC TGGTCTGGCG
TTCTCACAAC TCACCATCAC CAGCCCTGTA CCAAGAATGG TCTTCCAGCG CAATTTAGCA
AATGAAGCCA GTGTTAGTAT AACCGGAATT GCCTCTTCTT CAGCAACAAC CATAGAAGCT
CGTTTTGTCC CCATGGCCGT TGGTCAGGGA AATGTTACGG ACTGGAAGCC GTTGAAATTT
CTACCTCAGT CGACGGCCTT TCACGGGCAG GTGACCGTAT CGGCAGGCTG GTACCGACTG
GATGTGCGAT CGCGGTCAGG GACAACTATC ACCGCCCAAA CCCAGGTCAA CCGCGTCGGT
GTGGGCGAGG TGTTTATTAT TGCCGGGCAG TCGAATGCCG AAGGTGGGTT TCAACGGCCG
CCCAGTTCGG TAGATGACCG GGTCATGTGC GTCGACTTCC GACAGGATAG CCTCAGTGAG
CAGTTGATCC CCTTACAATT TAGCCACATC AGTTACGGCA CCAGCATTGG TCCCAGCCAG
CCTCCCCATA TTTACAGCAT TTTAGGCGAT AAGCTCGCCC AGCGGCTTAA TGTTCCCATT
CTGTTTTTAG GCGCGGCTCT AGGCGGGACC AGCAGCGCCG ACTGGCAGCA ATCCGCAGCC
GGCAATATGG GCACCGGTCG TAATTCAGCC GTTTATCGGC GAATGGGGGC GGTTTTACTT
CATTATGTCA CCCGAACGGG GGCCCGGGCT GTTCTCTGGC ATCAGGGAGA AAGTGATCTT
CATTCGTCAA CACAGACGTA TTTCGACAAC ATCAAGTATG TCATTGAAAA AAGTCGGCAG
CAGCTTGGCG GGAAGCCTCT GGCATGGGCA GTTTCACGGG CAAGTTATAT CTTCGGGCAA
ACCAGTTCAT CTGTTATCGC GGCACAGAAC CAGCTCATCA ACAGTGTCTT TAACGTTTTT
GCCGGACCCG CTACCGATGG TATTACCGGC CCCGACAACC GGTTCGACGA TCTGCATTTT
GGCGGCAATG GGCTCTATCG GTTTGCCAGT GCCTGGGATG AGAGCCTGAC AGCCTCCTTT
TTTCAAAATG CACTGCCCGT TATGCCAATC GACTCGGTGT CGCTGATCAC GAGCGGTTAC
ACTATACCGC TTACCCGACG ACCGGGTGAG ACGGTTGCGG TCGCTTCTGT CCGCAGTGAT
GCGCATGAAT CGGACAATCA GTATGTTGCT CAGATTATCC GGGCCAGTGA TGGGGCGCTG
ATGGCCGAAT CCAGTCCAAC TACTGACAAC CCGATCTCGA TGGTGTTACC ATTTGCACTG
GCAAACGGGC AGTATCGTCT GCGTACCCGC TCTACTCATC CCGTTGTGCT GGGCACTCTG
GGCGAACCAT TCAATGTACA GCAGGATGCC ACCCCCCAGA CTCAACCCCC TATACAGCGA
CTACCTGTTA GCGGAGGAAC AGCCGATACA ACCATCAGAC GTTTTGCGTA TCGTTTTGAA
ACAGGCTCCC ATTCGTTTTA CGGGCTCATT CAGGCTACTT CGCCGGTAGA AGTTCGACTA
CAGAGTCTCG ACGGCAGCGG TTTCAATGAT TCTGACTGGC ACCTCGCTCC TCCCAGTTCT
CAGGCACCTG ATTATGATCA GTTCGCTGAC TTCAACTATA TCCGTAATTA CCCCCCTATT
GCCGGGGGAG TTGGTGGCGT GATTCCGGGG AGATACCGTT TTTCGATCCG TCGGCAGGGC
AACACCGGGC CGGGCTTATG GTATGAAATG ACGCTACTCA ACGGCCGAAA TATCCTATAC
TATCCCATGG AGCCCATTGG TACTGTTCCA CCAGTACTTA CCATCACCAA CTCGGTAACG
CCATGTCTGG TTGGCTCCTT TGCCGTAGCC GTCGACGTCG CCGAAAGTGC CCCGCAGGCA
GGCAATGTTT TCAGTGTCAA ACTGTCGGAT GCCAACGGCT CGTTTACCAA TGAAACAACC
ATTGGCACCG GTACAACCAG TCCTATTGCT GTCACCCTGT CGCCAACGCT TCCTGTGGGG
TCTAATTACC GTATTCGGGT TATTGCCAGC AATCCGGCGG TAGCCAGCGC CCCCAGCCAG
CCGTTTTCCA TTTGTGCCGG GGCCGATCTG TCCATGCAAA TGGCCATCAG TAATCGGGCA
TCGTTAACCA GTCAGCCCGT TACGTTAACA GTTGTACTAA CCAACGCAGG GCCAATGGAC
GCGACAAATG TAAAAGCCAG CAGCATACTT CCCGACGGGA TGAGTTTTGT CGATGCGGCA
TCAGGAGCCG TTAGTACAGC CGCAAACACC GTTTCCATCA ATGCGGGTAA TTTGCTCAAT
GGAGCCAGCA AATCGTTTGC GTTTCGGGTT AAACCTACTA AAAACGGCAC CTTTTTTACG
TCTGCCCAAA TTACGGCCAG TGATCAGTTC GACCCCGACA GCCAGCCCAA CTCAGGCACT
GGCGACGGGC AGGATGACGA AGGCAGCGTC GATTTGCGTA CACCCGACTC TGGTACGTTC
GTCAGCATAT CCCCCAATCC AGGCCAGGTA CCACTACCCC CCGTTCAGTC CAGCCAACCG
CCAGTAGACA ATACCAAAGC CGATCTGAGT TTGGCTATCG CCACCAACTC GCTGGTAGTT
TCCGCCAATC AGGTCGTAAA CATTCCTTTA ACCGTAAGCA ATTTGGGCGG GGCAAACGCG
ACAAATGTAT CCGTACAGGC GCTTTTACCC ACGGGCTGGC AATTAACGAC AACAGCGGGG
CTGACGGTCA GCGGGCAAAC TGTAAGCGGT ACCATTGGGT CCGTTGCAGC CGGTAGCACA
GGCACACTGG TACTTGTGGT GAAGATAACC CAGGCGGGTA CGCTGCAAGC CCAGATAGCT
GGCGCATCGC CTTCTGACCC CGACTCCACA CCGGGCAATG GCTACACGAA AGGCGAAGAT
GATGAGGCCA GATTAAGTCT GCGGATCAAG TAA
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| Protein sequence | MPFPFRWIGV IVLQLFSGLA FSQLTITSPV PRMVFQRNLA NEASVSITGI ASSSATTIEA
RFVPMAVGQG NVTDWKPLKF LPQSTAFHGQ VTVSAGWYRL DVRSRSGTTI TAQTQVNRVG
VGEVFIIAGQ SNAEGGFQRP PSSVDDRVMC VDFRQDSLSE QLIPLQFSHI SYGTSIGPSQ
PPHIYSILGD KLAQRLNVPI LFLGAALGGT SSADWQQSAA GNMGTGRNSA VYRRMGAVLL
HYVTRTGARA VLWHQGESDL HSSTQTYFDN IKYVIEKSRQ QLGGKPLAWA VSRASYIFGQ
TSSSVIAAQN QLINSVFNVF AGPATDGITG PDNRFDDLHF GGNGLYRFAS AWDESLTASF
FQNALPVMPI DSVSLITSGY TIPLTRRPGE TVAVASVRSD AHESDNQYVA QIIRASDGAL
MAESSPTTDN PISMVLPFAL ANGQYRLRTR STHPVVLGTL GEPFNVQQDA TPQTQPPIQR
LPVSGGTADT TIRRFAYRFE TGSHSFYGLI QATSPVEVRL QSLDGSGFND SDWHLAPPSS
QAPDYDQFAD FNYIRNYPPI AGGVGGVIPG RYRFSIRRQG NTGPGLWYEM TLLNGRNILY
YPMEPIGTVP PVLTITNSVT PCLVGSFAVA VDVAESAPQA GNVFSVKLSD ANGSFTNETT
IGTGTTSPIA VTLSPTLPVG SNYRIRVIAS NPAVASAPSQ PFSICAGADL SMQMAISNRA
SLTSQPVTLT VVLTNAGPMD ATNVKASSIL PDGMSFVDAA SGAVSTAANT VSINAGNLLN
GASKSFAFRV KPTKNGTFFT SAQITASDQF DPDSQPNSGT GDGQDDEGSV DLRTPDSGTF
VSISPNPGQV PLPPVQSSQP PVDNTKADLS LAIATNSLVV SANQVVNIPL TVSNLGGANA
TNVSVQALLP TGWQLTTTAG LTVSGQTVSG TIGSVAAGST GTLVLVVKIT QAGTLQAQIA
GASPSDPDST PGNGYTKGED DEARLSLRIK
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