| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4178 |
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| Symbol | |
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| ID | 8727937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5029160 |
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| End bp | 5030929 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_003388963 |
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| Protein GI | 284039033 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.242072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGGA CGCACACCTG CGGAGAACTC CGCCTTGCCG ACCACAACAC CACAGCCACT
CTTTGCGGCT GGGTTCAAAC CATCCGCGAT AAAGGCGGTG TTCTATGGAT TGACCTACGT
GACCGCTACG GTATTACCCA GCTTTTACTC GAAGACGGCC AAACCGCCCC TGAACTGTTC
ACGACAGCCC GGTCCCTCGG CCGCGAATTT GTGGTGAAAG CCACGGGAAC GGTTATCGAA
CGGAAATCGA AAAACCCGAA TATCCCCACC GGCGACATTG AACTGAAAGT AACCTCGCTG
GAGGTGCTGA ACCCCGCCAA ACTGCCGCCT TTCCTCATCG AAGACGAAAC CGACGGTGGC
GATGACCTCC GCATGAAGTA CCGGTATCTG GACTTACGCC GGAATCCCGT TCGCAAGAGC
CTCGAACTGC GCCACCGCAT GGCCCAGCAA ACGCGGGTGT ACATGGATGG GCAGGACTTC
ATTGAAGTGG AAACGCCGGT TCTGATTAAA TCGACGCCCG AAGGCGCACG GGATTTTGTG
GTGCCCAGCC GCATGAACCC CGGCGAATTT TATGCCTTGC CCCAGTCGCC CCAAACGTTT
AAGCAGTTGC TGATGGTATC GGGTTTTGAC CGGTATTACC AGATTGTCAA ATGCTTCCGG
GACGAAGACC TTCGCGCCGA CCGCCAGCCG GAGTTCACCC AAATCGACTG CGAAATGTCG
TTTGTGGAGC AGGAAGATAT TCTGAACATG TTTGAAGGGC TGGTTCGCCA CCTCTTCAAG
ACCGTTAAGG GCATCGATAT GGCCTCGGTT CCCCGCATGA CCTATGCCGA CGCGATGAAG
TTTTACGGCT CCGACAAGCC CGACACGCGT TTCGGCATGG AGTTCGTTGA ACTGAAAGGC
ACCTTCGACA CCGTCGACAT GACCTCGGGC AAAGGCTTCG GCGTATTTGA CTCGGCCGAA
CTGGTCGTGG GCATCAACGC ACCGGGCTGC GCACACTATA CCCGCAAGCA GCTCGATGAA
CTCACCGACT GGATCAAACG CCCGCAAATC GGTGCCAAAG GCCTTATCTA TGTTCGCTAC
AACGAAGATG GCACCCTGAA GTCGTCCGTC GACAAGTTCT ATTCCGAGAC TGAACTGAAA
GCCTGGGCCG CTCATTTCGG TGCTAAACCC GGCGACCTGA TGCTGATCGT TTCGGGCGAT
TGTGCCAAAG CCCGGAAACA ACTGAGTGAA CTACGCCTGG AGATGGGCAG CCGGTTGGGT
CTCCGCGATC CGAACGTGTT CAGTACGCTA TGGGTACTCG ACTTCCCGCT GCTGGAGTTT
GGCGAAGAAG AAAATCGCTG GTTCGCCATG CACCACCCGT TCACATCGCC CAAACCGGAA
GACATTCCGT TGCTGGATAC CGATCTGGGT GCCGTTCGGG CCAACGCCTA TGACCTGGTC
ATTAACGGAA CCGAAGTAGG TGGTGGCTCC ATCCGGATAT TCAACCGCGA TTTGCAAGCC
CGCATGTTCA GCATTCTTGG TTTCTCGGAC GAAGAAGCAA AAGCACAATT CGGCTTCCTG
ATGGATGCGT TCGAGTTTGG TGCTCCTCCG CACGGCGGTA TTGCCTTTGG TTTCGACCGC
TTGTGTTCGC TCTTCGGCGG GGCCGACTCC ATCCGCGACT TTATCGCTTT CCCGAAAAAC
AACTCCGGCC GCGATGTCAT GATCGATTCG CCCTCTGCTA TTTCACAAGC GCAGTTGAAC
GAACTGAAAA TTGCAACGAT AGCGAAGTAA
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| Protein sequence | MLRTHTCGEL RLADHNTTAT LCGWVQTIRD KGGVLWIDLR DRYGITQLLL EDGQTAPELF
TTARSLGREF VVKATGTVIE RKSKNPNIPT GDIELKVTSL EVLNPAKLPP FLIEDETDGG
DDLRMKYRYL DLRRNPVRKS LELRHRMAQQ TRVYMDGQDF IEVETPVLIK STPEGARDFV
VPSRMNPGEF YALPQSPQTF KQLLMVSGFD RYYQIVKCFR DEDLRADRQP EFTQIDCEMS
FVEQEDILNM FEGLVRHLFK TVKGIDMASV PRMTYADAMK FYGSDKPDTR FGMEFVELKG
TFDTVDMTSG KGFGVFDSAE LVVGINAPGC AHYTRKQLDE LTDWIKRPQI GAKGLIYVRY
NEDGTLKSSV DKFYSETELK AWAAHFGAKP GDLMLIVSGD CAKARKQLSE LRLEMGSRLG
LRDPNVFSTL WVLDFPLLEF GEEENRWFAM HHPFTSPKPE DIPLLDTDLG AVRANAYDLV
INGTEVGGGS IRIFNRDLQA RMFSILGFSD EEAKAQFGFL MDAFEFGAPP HGGIAFGFDR
LCSLFGGADS IRDFIAFPKN NSGRDVMIDS PSAISQAQLN ELKIATIAK
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