| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4174 |
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| Symbol | |
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| ID | 8727933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5024584 |
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| End bp | 5026020 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003388959 |
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| Protein GI | 284039029 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.427253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.28467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATAA AATCCCTTGA CCTTTTACGG CAGGAAGCCG CTCAAAGCGG AGAATCAACT
CTCAAACGTT CGTTAGGTGC GTTCAATCTG GTTGCTATTG GCATTGGTGT TATTATTGGA
GCCGGGTTGT TTTCGCTGAC GGGGCTGGCC GCTGCCAACC ATGCCGGACC TGCGGTAACG
CTTTCATTCG TTGTAGCCGC CGTAGGCTGC GCGTTCAGTG CGCTGTGTTA TGCCGAGTTT
GCGGCTATGG TGCCGGTTGC AGGCAGTGCT TATACGTACG CCTATGCTAC CCTGGGTGAG
TTGTTCGCCT GGATTATTGG CTGGGACCTG GTACTGGAGT ATTCAGTTGG GGCCGCTACG
GTAGCCATTA GCTGGTCGCA GTACCTGACC CGGTTTCTGA GTTATTTTGG GCTGCACCTG
CCGCCCCGGT TCATGGCATC GCCGTTCGAA ACGGTTATGG GAGCCGATGG AACGGCCGTT
TCGGGTTTCG TCAACCTGCC CGCCGTTCTG ATAGTGGTGC TTATTACCGG CATTATTATT
CGGGGTACAT CGGGTTCTAC CTTGTTCAAC TCCATTGTGG TAACGCTGAA GGTACTGGTT
GTGCTGGTGT TCATTGCGCT CGGCTGGCAG TACATAGACC CCGTTAACTA TCAGCCTTAC
ATTCCGGAGA ATACCGGTAC GTTTGGCGAA TTTGGCTGGA GTGGCGTATT ACGTGGCGCG
GGGGTTGTCT TTTTTGTCTT TATCGGCTTC GATATTGTGG CGACTATGGC GCAGGAGGCC
CGCAACCCCC AGCGCGACAT GCCCATTGGC ATCCTTGGAT CGCTGGTGGT TTGTACGGTG
TTATTTGTGC TTTTCGGGTA CGTCATGACA GGTATGGCCA ACTACACGGA GTTTAAAAAC
AGTGCCGCTC CGGTAGCCAT CGCCATTGCC AAAACGCCCT ATCGCTGGCT CGGCCAGTTG
ATTATCGGGG CTATTCTGAT TGGGTATACC TCGGTCATTC TGGTCGATTT ACTGGGTCAG
TCGCGGGTGT TTTTCTCGAT GAGCCGCGAC GGTCTGTTGC CCAAAGCGTT CTCCGAAATT
CATCCCCGCT TCCGAACCCC CTGGAAGGCA AACCTGCTGT TATGTGCGTT TATCGGCCTG
TTTGCGGGCT TTGTACCCAT CCGGGTGGTT GGCGAAATGA CGAGTATCGG AACGTTGCTG
GCTTTTGTGA TGGTTTGTGT AGGTATACTG ATTCTCCGCA AAAAACAACC CGACGCACCC
CGGTCATTCC GGACGCCCTG GGTACCGGTG GTGCCTGTTC TGGGCATTCT TACCTGTATG
GTCATGATGG TCTCACTGCC GGGCGACACC TGGCTGAGGC TGGTGGTGTG GCTGGCTATC
GGGCTGGTGA TTTACTTTTT GTATGGCCGA AAGCGGAGTA AATTGCGGGA AAGCTGA
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| Protein sequence | MRIKSLDLLR QEAAQSGEST LKRSLGAFNL VAIGIGVIIG AGLFSLTGLA AANHAGPAVT
LSFVVAAVGC AFSALCYAEF AAMVPVAGSA YTYAYATLGE LFAWIIGWDL VLEYSVGAAT
VAISWSQYLT RFLSYFGLHL PPRFMASPFE TVMGADGTAV SGFVNLPAVL IVVLITGIII
RGTSGSTLFN SIVVTLKVLV VLVFIALGWQ YIDPVNYQPY IPENTGTFGE FGWSGVLRGA
GVVFFVFIGF DIVATMAQEA RNPQRDMPIG ILGSLVVCTV LFVLFGYVMT GMANYTEFKN
SAAPVAIAIA KTPYRWLGQL IIGAILIGYT SVILVDLLGQ SRVFFSMSRD GLLPKAFSEI
HPRFRTPWKA NLLLCAFIGL FAGFVPIRVV GEMTSIGTLL AFVMVCVGIL ILRKKQPDAP
RSFRTPWVPV VPVLGILTCM VMMVSLPGDT WLRLVVWLAI GLVIYFLYGR KRSKLRES
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