| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4173 |
|---|
| Symbol | |
|---|
| ID | 8727932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5023287 |
|---|
| End bp | 5024576 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003388958 |
|---|
| Protein GI | 284039028 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.235964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.356034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAC CCGCCCCCAA CGCAGGACTA GACCGGGCGA TCCGGCCATT CGATTTTATT
GCGTTGATCA TCAATATTAC CATTGGCGCG GGTATTTTGG GCCTGCCTGC CAAATTATAT
GCGCTGGTAG GCACCTGGAG TCTGCTGGCG TATGGAGTTA GTGCGGCCAT CGTAACGTTA
ATTATTCTGT GTTTCGCGGA GGTAAGCAGC CGATTCAGTG GTACCGGCGG ACCTTACCTC
TACGCCCGCG TTGCGTTTGG GCCGCTGGTT GGCTTCGAGG TTGGCTGGCT ATTCTGGCTA
TCGCGCATAG CGGCCTTTGC GTCGATCTGT AATTTGTTCG TCAGCTATGC CGCACTATTT
CGCCCCCAAC TGGGCAGCGG CTGGGAGCGG GCCGGACTCA TAACGGTCAT TGTTGTGGTG
CTGGGTGTTA TCAATTATTT GGGCGTTCAA CGGTCGGCGC GGGTAAATAC GGTATTTACT
ATCAGTAAGT TAGTGGCCAT CGGGGCGTTT GCGCTTGGCG GCTTGTTTTT TGTAAATCCA
CACGCTTTTA CATTTCCACG CTTTCCGGCA TACACCTCGT TTTCGCAGGC CGTCCTGTTG
CTTATTTTCA CCTTTTCGGG CTTCGATGTG GCGGCCATTC CGTCGGGGGA GGTGCAGCGT
CCCCAGCGAA CGGTGCCGCT GTCGCTCCTG GTATCTATTG GTACAGTGGC GGTATTGTTT
ATGGCGGTGC AGGTAGTTTG CATTGGAACG CTGCCCGACT TAACCCATTC GGAGCGTCCG
CTGGCCGATG CCGCCGGGCA GTTTATCGGT CCGGCCGGCG CTGTATTTAT TACCGTTGTG
GCTTTGCTAA CGGCGCTGGG AACGTTGCAC GCCCTCATGT TAACCGGCCC CCGACTGTTG
TTTGCAATGG CCGAACAGGG GCAATTACCC CGTTGGCTGG CTCGGACGCA CTCGCGTTTT
CGTACACCTT ATGTCGCCAT TTTCGTTACG GCTGCGTTGC AGTTCCTGCT GGCTGTAACA
GGAACATTTC TGTATGCACT AACGCTAAGC ACCCTGATAC GCCTGGCGTA CTTTGCCCTG
ACCAGTGCGG CCCTGCCCGT TCTGCGTCGG CGTACCGATG TGCCAGTGGC GCAGTTCCGG
GTGGCGGGTG GCGCAGTCGT GTCGGGTATT ACGGTGCTGT TGTGCGGCTG GCTATTAAGC
AATAGTTCAG GCCGGGAAGC CCGCGATGTT GGTATTGCCG CCGGTATTGG ACTGCTTATC
TTTCTGGGAA TGCGGAGCCA GCCCAAATAA
|
|---|
| Protein sequence | MTPPAPNAGL DRAIRPFDFI ALIINITIGA GILGLPAKLY ALVGTWSLLA YGVSAAIVTL
IILCFAEVSS RFSGTGGPYL YARVAFGPLV GFEVGWLFWL SRIAAFASIC NLFVSYAALF
RPQLGSGWER AGLITVIVVV LGVINYLGVQ RSARVNTVFT ISKLVAIGAF ALGGLFFVNP
HAFTFPRFPA YTSFSQAVLL LIFTFSGFDV AAIPSGEVQR PQRTVPLSLL VSIGTVAVLF
MAVQVVCIGT LPDLTHSERP LADAAGQFIG PAGAVFITVV ALLTALGTLH ALMLTGPRLL
FAMAEQGQLP RWLARTHSRF RTPYVAIFVT AALQFLLAVT GTFLYALTLS TLIRLAYFAL
TSAALPVLRR RTDVPVAQFR VAGGAVVSGI TVLLCGWLLS NSSGREARDV GIAAGIGLLI
FLGMRSQPK
|
|---|
| |