| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4170 |
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| Symbol | |
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| ID | 8727929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5018403 |
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| End bp | 5021312 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_003388956 |
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| Protein GI | 284039026 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.353568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.732695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC GCTTTCCTTT ACTGCTACCC TTCCTCTGCC TCTTTTCTGC CGGAGTGACG
TACGCCCAAA CCCGACTCGT TGAGAAAGTA ACCCGGCAGG GTAACGAACT CGTTATTCCC
TACGAGAAAT ACGTTCTGCC CAATAGCTTA ACGCTAATTG TTCACGAAGA CCATTCCGAT
CCCATCGTTC ATGTCGACGT CACGTACCAC GTAGGCTCGG CCCGTGAAGA AATCGGGAAG
TCGGGTTTTG CCCACTTCTT CGAACACATG ATGTTTCAGG GTTCCGACCA CGTAGCCGAC
GATGAGCATT TCAAAATCGT GACCGAATCG GGCGGAACGC TCAACGGATC GACCAACCGC
GACCGCACGA ACTATTACGA AACGCTCCCC AGCAACCAGC TCGAACGGGC ACTCTGGCTC
GAAGCCGACC GCATGGGCTT TCTGCTGGAT GCTGTTACGC AGAAGAAATT CGAGATTCAG
CGGGCTACCG TTAAAAACGA ACGCGGCCAG AATTACGACA ACCGGCCTTA TGGACTGGCT
GGTGAGTACG TAGCCAAAAA CCTGTATGCG TATGGTCATC CCTACTCATG GCTCACCATC
GGCTACATCG AAGACCTGAA CCGAGTCAAT GTAAACGACC TGAAAAATTT CTTCCTGCGG
TGGTACGGCC CCAACAATGC CGTGCTGACG ATTGGGGGCG ATGTAACCGC CAAGCAAGTA
GTAGCCCTGA CGGAAAAGTA CTTCGGTTCC ATTCCGCGTG GTCCGGAAGT AACAAAAACG
CAGGTGCCCA CGCCCGTAGT GGATAAGGAT CGGTACGTTT CGTACGAAGA CAACGTACGC
TTCCCCATGC TGCAACTGGT GTTTCCGACG GTGCCGAACT ACCACCCGGA CGAAGCGCCC
CTCGACGCGC TGGCCGAAAT TCTGGGCGGT GGTAAAAACT CGCTTTTTTA CAAGAATCTG
GTGAAAACAC AACTGGCCGT GCAGGCGAAT GCCTCGCACC CCGCCACGGA ACTGGCCGGG
CAGCTGGCCA TGGTCGTCCT GCCGTTTCCG GGCAAGAGTC TGGACAGTAC AGAAGCCGTC
GTTCGCCGGA CACTGGCCGA ATTTGAACGA CGGGGTGCTA CCGACGATGA TATTGCGCAA
TTCAGAGCCA CCCGCGAAGC CGACCTGATC AACGGCCTGT CGAGTGTATC CGGGAAAGTG
TCGCAACTGG CGGCTTTCCA GACTTATCTC GGCAACCCGA ACTACCTGCC GCAGGAGCTG
AAACGCTACA AGAGTGTGAC AAAGGCCGAT GTAATGCGGG TATACAACCA GTACATTAAA
GGCAAAAACG CGGTAATCCT GACGGTATAT CCCAAAGGGA AACCCGAAAT TGTGGCGAAG
CCCGATAACT ATACGGTGTC GACGGCTAAC TACAAGGCAC CAGACTACGG CTATAACGGA
CTGGCCTACA CCAAGCCCAA AGACAGTTTC GACCGAGCGG TTAAACCCGG TCCCGGCCCG
AACCCGGCGC TGAAAGTCCC TCCCTTCTGG AACGACAAAC TACCCAACGG CATCAAAGTG
ATTGGCGCTC GCAACGACGA AATTCCGGCG ATAACGATGC TGTTCACCAT CAAAGGCGGG
CATTTGCTGG AAGCCAATGA TCCATCGAAG GCCGGGGTGG CACAGTTGAC CGCTTCGCTG
ATGAACGAAG CCACCCAGAA CTATACCAAC GAGCAACTCA ATACGAAACT CGAAAAGTTG
GGCAGCAGTA TCGATATCCG GGCCAATACC GAAGAAATCA CCATCTCCGT CGAAGCCTTG
ATAAAGAACC TGGATTCGAC ACTGGCTCTG GTTGAAGAGA AATTGCTGCG GCCCAAATTT
GCTCAGGACG ATTTTGATCG ACTGAAGAAG CAACAGCTCG AACTGATCAG CAACCAGAGT
ACACAACCGG TTGTGATTGC CAATAAAGCC TATAGCAAAC TGTTGTACGG CTCTGCCAAC
ATCCGGTCGG TGCCCTTGAG CGGAACGACC AAAACCGTTG AAACCATCAC CCTGGACGAT
GTGAAGGCTT TCTACAAAAA TTACCTCTCG CCATCAGTAA CGAATATGGT GGTTGTAGGC
GATATTGAGC AGGCGGCTAT CATGCCTAAA CTGGCGTTTT TATCGAAGTG GGCAGCTAAA
CCGGTAAAAA TACCGACGAC ACCGGCCCCT AAGAAAATCG ACAAAACCCG CCTTTATCTG
ATCGACAAAG AACAGGCGGC TCAGTCCGAA ATTCGTATCG GTTACCTCAC CAATATGCCT
TACGATGCTA CCGGTGATTA CTACAAGGCC GCATTAGCCA ACTACATGCT GGGTGGAGCC
TTCAGCAGCC GCATCAACAT GAACCTGCGC GAAGACAAAG GCTATACCTA CGGGGCTCGC
TCTGGTTTTT CGAGTACTAA CACCCCCGGC CCCTTTACGG CGCAGGCGGG CGTGAAAGCA
GCGGCAACAG ACAGCTCAGT AATTGAATTT GTGAAGGAGA TTACCAACTA CGCCAAGTCG
GGCATTACGG AGCAGGAACT GGCCTTTGTG AAAAGTTCGC TGGGACAAAG CGACGCCCTG
CGTTACGAAA CATCGCTCCA GAAGGCGTTT TTCCTCAGCC GGATCATCGA GTACAACCTG
CCCCGCAATT ATGTGGAGCA GCAGAGCGAA ATTCTCCGTA AGATCACCAA AGCCGAAATC
GACGCGGTTG CCAAAAAGCA ACTACCTATC AATAACATGA TTATAACGGT AGTTGGTAAC
AAGCAATTGA TTAAACCCGG CCTGGAAAAA CTGGGCTACG AACTGGTTGA GCTGGATAAA
GAAGGCAACG TACTGGGTTC GTCAACCACC CCGGCCGACG TACCAGCGGG CGGTGCCCCG
GCTAAAATGT CATCGGGCAA GAAGAATTAA
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| Protein sequence | MTTRFPLLLP FLCLFSAGVT YAQTRLVEKV TRQGNELVIP YEKYVLPNSL TLIVHEDHSD
PIVHVDVTYH VGSAREEIGK SGFAHFFEHM MFQGSDHVAD DEHFKIVTES GGTLNGSTNR
DRTNYYETLP SNQLERALWL EADRMGFLLD AVTQKKFEIQ RATVKNERGQ NYDNRPYGLA
GEYVAKNLYA YGHPYSWLTI GYIEDLNRVN VNDLKNFFLR WYGPNNAVLT IGGDVTAKQV
VALTEKYFGS IPRGPEVTKT QVPTPVVDKD RYVSYEDNVR FPMLQLVFPT VPNYHPDEAP
LDALAEILGG GKNSLFYKNL VKTQLAVQAN ASHPATELAG QLAMVVLPFP GKSLDSTEAV
VRRTLAEFER RGATDDDIAQ FRATREADLI NGLSSVSGKV SQLAAFQTYL GNPNYLPQEL
KRYKSVTKAD VMRVYNQYIK GKNAVILTVY PKGKPEIVAK PDNYTVSTAN YKAPDYGYNG
LAYTKPKDSF DRAVKPGPGP NPALKVPPFW NDKLPNGIKV IGARNDEIPA ITMLFTIKGG
HLLEANDPSK AGVAQLTASL MNEATQNYTN EQLNTKLEKL GSSIDIRANT EEITISVEAL
IKNLDSTLAL VEEKLLRPKF AQDDFDRLKK QQLELISNQS TQPVVIANKA YSKLLYGSAN
IRSVPLSGTT KTVETITLDD VKAFYKNYLS PSVTNMVVVG DIEQAAIMPK LAFLSKWAAK
PVKIPTTPAP KKIDKTRLYL IDKEQAAQSE IRIGYLTNMP YDATGDYYKA ALANYMLGGA
FSSRINMNLR EDKGYTYGAR SGFSSTNTPG PFTAQAGVKA AATDSSVIEF VKEITNYAKS
GITEQELAFV KSSLGQSDAL RYETSLQKAF FLSRIIEYNL PRNYVEQQSE ILRKITKAEI
DAVAKKQLPI NNMIITVVGN KQLIKPGLEK LGYELVELDK EGNVLGSSTT PADVPAGGAP
AKMSSGKKN
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