Gene Slin_4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4165 
Symbol 
ID8727924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5013397 
End bp5014518 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content50% 
IMG OID 
ProductUDP-galactopyranose mutase 
Protein accessionYP_003388951 
Protein GI284039021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.367331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCG ATTATGTCAT TGTTGGTGCT GGCTTTGCCG GTAGTGTGTT GGCCGAACGC 
CTGGCAACGC AGGCTGACAA AAAAATCCTG ATTATTGACA AACGCCCGCA CATCGGTGGC
AATGCGTACG ATTGCCTGAA TGAAGATGGC ATCCTGATTC ACCAATATGG GCCGCATATT
TTCCACACCA ACTCTCCTGA AGTTGTTACT TACCTGTCGC AGTTTACCGA ATGGCGGCCT
TACGAACACC GCGTACTGGC TTCAGTAGAT GGTCAGCTTT TGCCAATTCC GATCAATCTG
GATACCGTTA ATAAATTGTA TGGGTTCTCA TTTACATCCG AAGAACTGGC CGACTATTTT
GCGTCGGTAG GTGAACCCGT TAAGGATATC AAAACCTCCG AAGACGTCGT TGTCAGCCAG
GTGGGGCGCG ACTTATACGA GAAGTTTTTC CGGGGGTATA CCCGCAAGCA ATGGGGAGTC
GATCCATCCG AACTCGATAA GATGGTTACG TCACGCATTC CTACCCGAAC CAACCAGGAC
GACCGCTATT TTACGGACCA GTTCCAGTGC ATGCCTTTAC ACGGCTACAC TAAAATGTTT
GAAAAAATGG TGGCGCACTC CAACATTCAG TTGATGCTCG GCACCGATTT CAAACAGGTG
AAAGATGAGC TTTCGTACGA TGAACTGATT TACACCGGCC CTGTCGACGA ATACTTCGAC
TTCTGTTTTG GCAAACTGCC GTACCGGTCC CTGCGCTTCG ATCACCAGAC GGTCGATGTG
GAAGATTACC AGCCCGTTTC GGTGGTCAAC TACCCCAACG ACCATGCCTA TACCCGTATT
ACGGAGTATA AAAAGCTAAC CGGACAGGAG CATCCAAAAA CAAGCATCAC ATTTGAGTAT
CCGCAGGACG AAGGCGACCC GTATTACCCG GTGCCAAGAC CCGAAAATGC GGCCCTCTAC
CGGCAGTATA AACAATTGGC CGACGAGCAG AAATCCGTGC ATTTTGTTGG ACGGCTGGGT
ACCTACCGCT ACTATAATAT GGATCAGGTA GTGGCTCAGG CGCTAACACT GTACAAGAAA
CTGGTTGGTG CCGACTCATT GCAGGAGGCA ATAAACTCCT AA
 
Protein sequence
MHFDYVIVGA GFAGSVLAER LATQADKKIL IIDKRPHIGG NAYDCLNEDG ILIHQYGPHI 
FHTNSPEVVT YLSQFTEWRP YEHRVLASVD GQLLPIPINL DTVNKLYGFS FTSEELADYF
ASVGEPVKDI KTSEDVVVSQ VGRDLYEKFF RGYTRKQWGV DPSELDKMVT SRIPTRTNQD
DRYFTDQFQC MPLHGYTKMF EKMVAHSNIQ LMLGTDFKQV KDELSYDELI YTGPVDEYFD
FCFGKLPYRS LRFDHQTVDV EDYQPVSVVN YPNDHAYTRI TEYKKLTGQE HPKTSITFEY
PQDEGDPYYP VPRPENAALY RQYKQLADEQ KSVHFVGRLG TYRYYNMDQV VAQALTLYKK
LVGADSLQEA INS