Gene Slin_4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4159 
Symbol 
ID8727918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5007527 
End bp5008354 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content54% 
IMG OID 
ProductFRG domain protein 
Protein accessionYP_003388945 
Protein GI284039015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGAAG AACGGGCGAC AACCTGGGAT CAATTAATGG ATTTCCTGTA CGAAAATGCC 
TGGACGCCAT CGCTCAGACG GTTCCGCCCG CCGTTTGTGT TTCGGGGAAT GGCCGATGTG
GCCTTTCTGC TGGATACATC CCTGATGCGG TTGGGAGAGG GCTACCAGCA CAGCGAGCGG
CATTTACTGC GAAATTTTAA GAAATACGCC CTTCGGAATG TCATCGAGCG GGATTCCTTC
TGGTATTGGC TTTCCGTTGC CCAACACCAT GGGCTACCCA CCCGGCTGAT GGACTGGACA
TTTTCGCCGT ATGTGGCCCT GCATTTCGTT ACAACTTCGC TGGAGTTGTA TGATCGGGAT
GGCGTTGTCT GGTGCCTCGA TTACCAGAAA GCTCACCAGC AGCTCCCTCC TCCCCTCAAA
CAACTGCTGG CAGACGAAGG CGCTGACCTT TTTACGGTCG ACATGCTCAG CCATATTCCG
TCGCTGGATG CGTTTGACAA GCTGGCAGAC GAACCGTTTG CTCTCTTCCT CGAACCGCCA
TCCATCGACG ACCGGATCAT CAACCAATAC GCCCTGTTTT CGGTAGTCTC GAATCCTACC
GTCAGCCTCA ATCAGTGGCT GGAGACGCGC CCCGATATGT ACCGAAAGCT CGTGATCGAC
CACCAGCTTA AATGGGAGAT CCGCGACAAA CTCGATCAGG CCAATATCAA CGAGCGAGTC
TTGTTCCCCG GGTTGGATGG TTTGAGCCAG TGGCTACGCC GTCAGTATGT GCAGGCAGAC
TGTCATCAGC CCATCGACGA TTATCAGAAC AGGTTTACAA GACACTAA
 
Protein sequence
MCEERATTWD QLMDFLYENA WTPSLRRFRP PFVFRGMADV AFLLDTSLMR LGEGYQHSER 
HLLRNFKKYA LRNVIERDSF WYWLSVAQHH GLPTRLMDWT FSPYVALHFV TTSLELYDRD
GVVWCLDYQK AHQQLPPPLK QLLADEGADL FTVDMLSHIP SLDAFDKLAD EPFALFLEPP
SIDDRIINQY ALFSVVSNPT VSLNQWLETR PDMYRKLVID HQLKWEIRDK LDQANINERV
LFPGLDGLSQ WLRRQYVQAD CHQPIDDYQN RFTRH