Gene Slin_4158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4158 
Symbol 
ID8727917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5006698 
End bp5007186 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF892 
Protein accessionYP_003388944 
Protein GI284039014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TGCAGGAATT TATGGAGCAT ACGATCCAGG ATCTATACTC TGCCGAAAAC 
CAGATTCTGG AAGCGCTACC CCAACTTATT GAGCGTGCCC AGAACGACCA GCTCCGTCAG
GCGCTACAAA CGCACCAGCG TGAGACAGAG CAGCAGGTAC AGCGGCTGGA GCAGATTGCC
CAACAAATGG GCGTTGATCC GGATGGAGAA ACATGCATGG CCATGCAGGG ACTGGTTGAA
GAAGCGCAGG ATTTGCTGAG CCAGATCGAA GATCCTCAAC TGGCTGATGC CGCGATCATC
GGTGCCGCTC AGAAAGTTGA ACATTACGAA ATTGCTGCCT ACGGTACCGC CCGTACGCTG
GCTCAGCAGG CTGGTCAGGA TCAGGCAGCT GACCTGTTTG CCCAAACGCT GGAAGAAGAA
AAAGCAACCG ACGAAAAACT GACCGTCATT GCTACCAGTT CGGTAAATCA ACAGGCCGCT
CAGGCATAA
 
Protein sequence
MKTMQEFMEH TIQDLYSAEN QILEALPQLI ERAQNDQLRQ ALQTHQRETE QQVQRLEQIA 
QQMGVDPDGE TCMAMQGLVE EAQDLLSQIE DPQLADAAII GAAQKVEHYE IAAYGTARTL
AQQAGQDQAA DLFAQTLEEE KATDEKLTVI ATSSVNQQAA QA