Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4152 |
Symbol | |
ID | 8727911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5000122 |
End bp | 5002809 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | cyanophycin synthetase |
Protein accession | YP_003388938 |
Protein GI | 284039008 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.38257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA TAGATATTCG AGCACTGAAA GGGCCTAACT ATTGGTCAAT TAAGCGCCCT AAACTGATCG TGATGCGGTT AGATTTAGAA CAACTGGAAG AATTTCCGTC CAACAGAATT GACGGCTTTT ATGAACGCCT TCAACACCTT ATACCCAGCC TGTATACCCA CGAATGTTCG GAAGGGCGAC CGGGGGGATT TTTCTACCGT GTGGAGCGGG GAACCTGGAT GGGGCATATT ATTGAACACA TCGCGCTGGA AATACAGACA CTGGCGGGTA TGGATTGTGG CTTTGGGCGG ACACGCAGTA CGGGCGATTA TGGCATCTAC AACGTCGTAT TCGCGTATCA GGAAGAACGG GCCGGTCTCC AGGCGGCTTA TTGTGCAGTT AATATTGCCC AGGCACTTAT TGAAGGCCGG GCGTATGACC TGCAAGCCGA CATCACGCTC CTGAGTCAAC TATACGAAGA AGACCGGCTG GGGCCCAGCA CAGCCGCTAT TGTGAATGCC TGCGTTCAAA AAGGGGTTCC CTACACACGA CTCGACACCG ATTCGACCGT TTTGTTAGGC TACGGCATTG CCCAGAAACG TATACAGGCA GCCGTTAGCA GTCAGACGAG TTCGATTGCC GTTGAGCTGG CTGCCGACAA GCATGAAACC AAACGACGAC TAGGCAAAGC GGCTATTCCC GTACCTACAG GACTGGTAGT GGAAACAGAA GCCGAACTTC AGGCGGCTCT CGACAAATTA GGGTTTCCAC TGGTTGTCAA ACCCCTCGAT GGCAATCATG GCCGGGGCGT AACCACCAAT ATTCAAACCA GGGAGGCACT TCTCATCGCC TTTCAGGTAG CCAAGGCGCA CAGCGAAGGG GTACTGATAG AACAGTTTGC ACAGGGATAT GACTTCCGAC TGCTGGTGAT CGACTATAAA CTCTGCGCCG TAGCGCAACG GATACCCGCC CGCGTCATTG GCGATGGTTC TTCCACAATC AGCCAGCTTA TTGATGGCAT CAACAGCGAC CCCCGCCGGG GCGACGGACA CGTGAATCTG TTAACCAAAA TAAGCATTGA CGAGGCCACG ATGGCGATTC TGACCGAACA AAATCTGGTG CCGGAATCCG TGCTGCCCGC CGGGAAAGAA CTCTATCTAA AAAAAACGGC TAACCTGAGT ACCGGTGGTA CGTCTATCGA CATGACCGAT CAGGTGCACC CCGAAATCAA AGCTATGGCC GAACGAACTG CCCGCGTCAT TGGCCTGGAT ATCTGCGGCA TCGACCTGAT TGCGCAGGAC ATTACCCGCT CGCTACACCG GTCGGGGGCG GTTGTTATCG AAGTGAATGC CGGGCCGGGC TTACGGATGC ACACCCACCC ATCAGAAGGC AAGCCCCGCG ATGTCGGCAA AGCCATCGCC GATATGCTCT TTCCACATAC AGTTAATTCA GGAGCATCCA GACAGGGTCA GTCCAGACAG GGCCAATCCA GGCTGGGCCG AATTCCGATT ATCGCCGTAA CAGGTACGAA CGGAAAGACC ACCACGACCC GGCTCACCCG ACACTTGATT CGGCAGGCTG GTTATACGGT CGGCTTTACC ACGACCGAGG GCGTTTATAT CGGTGATACG CTTATTGAGG AGGGCGACTG CACCGGTCCG GTAAGTGCCG AAAAAGTGCT ACAGGACCCC TCTGTAGAGT TCGCAGTGCT GGAATGTGCC CGCGGGGGTA TGCTCCGTTC CGGTCTGGCC TTCGACCAGT GCGATGTGGG TATCGTGACC AATGTAGCGG CCGATCACCT CGGCTTGCGG GACATTAACT CGGTAGAAGA TATGGCGCGG GTCAAGGCTA TTGTGGCTGA AAGTGTGAAA CCCGACGGCT ACGCCGTGCT CAATGCCGAC AACCCGCACA CCTATGCCAT GCGCCATTTA GTGAGCAGTC AGGTGGCGCT GTTCAGCATG GACCCGGCCA GCGAACGGAT CGTGGCGCAT TACCGGGCCG GTGGGCTGGC GGCTGTTTAC GAAGATGGGT ACATCACGCT CCGGCGTGGT GACCAGTGCA TCCAGGTCGA ACACGTAAAC AATATCCCAC TGGCCTTTGA GGGAAAAGCA CCCTTCATGA TCGAAAATAT CATGGCGGCT GTGCTGGCTG CTTATTGCCA GGAGCTGCCA TTTCATCTTA TTGCCGAAGG GCTACGTTCG TTTGTACCTT CTTTTGAGAA CACCCCCGGC CGGATGAACC TCTTCTGCTT CCGGAACTAC TGTGTACTGG TCGATTATGC GCATAACCCA CATGGCATAG CCGCGCTGGG CGAGTACATA AAGCAGGCCG GGGCGGTGCA TAAAGTAGGG ATTCTGACCG GCGTAGGCGA CCGTCGGGAT GAAGATATCA TTGCCGTTGG CCGGGTAGCG GCTACGCTAT TCGACGAGAT CATTATCCGG TTCGACGAAG ACAGCCGGGG CCGTGATACC GACCAGATTG CCAGCCTCAT CCGGCAGGGC ATTTACGAAA TAGACCAAAA CAAGCCCACG CACATTATCC CGGACGAACT GGCCGCGCTC ACCTACGCCA TTGAGCATGT GCAGGAGTCG ACCATGATCG TTCACCTGTC GGACCGGATC AACCGATCGG TGGAGATTGT GCGGGAGTTT AAGGAGCTGG AAGAGAAATT CGACCTCCAC CCCGATTTGC TGGTGTAG
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Protein sequence | MKIIDIRALK GPNYWSIKRP KLIVMRLDLE QLEEFPSNRI DGFYERLQHL IPSLYTHECS EGRPGGFFYR VERGTWMGHI IEHIALEIQT LAGMDCGFGR TRSTGDYGIY NVVFAYQEER AGLQAAYCAV NIAQALIEGR AYDLQADITL LSQLYEEDRL GPSTAAIVNA CVQKGVPYTR LDTDSTVLLG YGIAQKRIQA AVSSQTSSIA VELAADKHET KRRLGKAAIP VPTGLVVETE AELQAALDKL GFPLVVKPLD GNHGRGVTTN IQTREALLIA FQVAKAHSEG VLIEQFAQGY DFRLLVIDYK LCAVAQRIPA RVIGDGSSTI SQLIDGINSD PRRGDGHVNL LTKISIDEAT MAILTEQNLV PESVLPAGKE LYLKKTANLS TGGTSIDMTD QVHPEIKAMA ERTARVIGLD ICGIDLIAQD ITRSLHRSGA VVIEVNAGPG LRMHTHPSEG KPRDVGKAIA DMLFPHTVNS GASRQGQSRQ GQSRLGRIPI IAVTGTNGKT TTTRLTRHLI RQAGYTVGFT TTEGVYIGDT LIEEGDCTGP VSAEKVLQDP SVEFAVLECA RGGMLRSGLA FDQCDVGIVT NVAADHLGLR DINSVEDMAR VKAIVAESVK PDGYAVLNAD NPHTYAMRHL VSSQVALFSM DPASERIVAH YRAGGLAAVY EDGYITLRRG DQCIQVEHVN NIPLAFEGKA PFMIENIMAA VLAAYCQELP FHLIAEGLRS FVPSFENTPG RMNLFCFRNY CVLVDYAHNP HGIAALGEYI KQAGAVHKVG ILTGVGDRRD EDIIAVGRVA ATLFDEIIIR FDEDSRGRDT DQIASLIRQG IYEIDQNKPT HIIPDELAAL TYAIEHVQES TMIVHLSDRI NRSVEIVREF KELEEKFDLH PDLLV
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