| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4125 |
|---|
| Symbol | |
|---|
| ID | 8727884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4972588 |
|---|
| End bp | 4973331 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | heat shock protein DnaJ domain protein |
|---|
| Protein accession | YP_003388911 |
|---|
| Protein GI | 284038981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00694826 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0000294861 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGT TATCTGGTTT AACCAACTCA CCGACTTCGC ATCTCCAAAT TCGCTTGTTG
GTAGCCGATA TTGCGGACCT CGAAGCAGAA AGAGCCCGCA TTCAATCCCT CATTGACTCA
TACTACCGAC GTCTGCACCA CCAGCTCGGC GACTTGATGA GCGAAATTGC CCAATTGCAG
CTGCAACTCG CTACCCGGCG AGCCAGTCAA ACACGCCGTC GGAGCGATGC AGAAGCGGCC
CACAGCGCAC GCGTCCGCTT TGAGCAAACC CAGCATACAG TGCAGGAAGC GCTGGCGAAT
ATGCCCACCG AGCCGGATAC CGCTGTTGAT GAAACCGAAC TTCGGAAATT ATACCGGCAG
GCCGTGGCCC AGGCCCACCC TGATCTGTTT TTTAATGAGC CGGATAAACA GAAACAGGCA
ACGGCCTTTA TGGCTGAACT CAACGAGGCT TACGAACGGA AAGACCTGAC CGTCGTACGT
AAACTGGCGC AGCAACTCCA GGACGGCCTG CTCTTTCTGG ACGAGACCAG CCTGCACAAC
GACCCCGAAG CCCTTCAACA ACTGGTTGAG CGGCTTACCC AACGCAAACA GGCACTTGAA
GCCGACATAC AGACCCTCCG ACGGCAGGAA GGTTACAACA TTATGTCGCA GAGCCCACCA
GAGCAGGCCG TCCACTTCGA CCAGCTACAA AAAAACTTGC AGGAACACCT CGCTATATTG
GCGCAGTCGC TGGATACACT GTAG
|
|---|
| Protein sequence | MNPLSGLTNS PTSHLQIRLL VADIADLEAE RARIQSLIDS YYRRLHHQLG DLMSEIAQLQ
LQLATRRASQ TRRRSDAEAA HSARVRFEQT QHTVQEALAN MPTEPDTAVD ETELRKLYRQ
AVAQAHPDLF FNEPDKQKQA TAFMAELNEA YERKDLTVVR KLAQQLQDGL LFLDETSLHN
DPEALQQLVE RLTQRKQALE ADIQTLRRQE GYNIMSQSPP EQAVHFDQLQ KNLQEHLAIL
AQSLDTL
|
|---|
| |