Gene Slin_4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4122 
Symbol 
ID8727881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4969329 
End bp4970054 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388908 
Protein GI284038978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000002243 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00000977618 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTCTTAA GAACGGCATT AAGACGAGGG CATCACGTAG TTAGCCGAGC CTCATCTAGG 
AGCTACGGAC AGTCCCTAAA ACCAAGAGCA GAAATGCCTG GTCAACAGGG TGTGCTTCGC
AAGAAAGATC CGGCACATGA GTATTGGGAG AAACGCGGGC AGGGAACCTG GAATATAAGC
CGGGGAATAC GGGAAGCATT CTGGGGCGTA AAAGGATATA ATATGAGTCA TTTTGTTGTC
CCGAAATCAA AAGCCATAGC TGAAGTTCGT CGTGACCCTG CGCGAGCAAA CTGGGATAAG
GAACTAAAGA GAATGAGGGT TAAATACCCA CATCTGTCAT TCTTAATTGA CCAATGGCGT
TTACAGAATC GGGCTCAGGC CTTAGGGGGA AATCCGCTGC CGGTTAAAGC CGGAAGGATA
ATGCTTGAAG GCCTGGAGCG GATGGGTCGT GCAACCACTT TAACAGGAAA ACTCGGAGGG
CATTGGTATG CTCAAATTTA TTCGTTAGGA AACGAAGGAT TTAGAGGAGG AGCATCTTAT
TTCATGCATG CACTAGCTAT CCCGTGGCAA TGGCCAGGAA TTGCCACCCG GCACTTCTTC
AGTAAATATT TCAACATCCC GGAAAATTTC CATCCAATCA GAATAGCTGG TAGAATGGCT
GGCCGTAAAG TAATAACATG GAAGAGAGGG AGGAAGTATA AAGCAAAGAA CAGGGGGAAT
AAGTAA
 
Protein sequence
MFLRTALRRG HHVVSRASSR SYGQSLKPRA EMPGQQGVLR KKDPAHEYWE KRGQGTWNIS 
RGIREAFWGV KGYNMSHFVV PKSKAIAEVR RDPARANWDK ELKRMRVKYP HLSFLIDQWR
LQNRAQALGG NPLPVKAGRI MLEGLERMGR ATTLTGKLGG HWYAQIYSLG NEGFRGGASY
FMHALAIPWQ WPGIATRHFF SKYFNIPENF HPIRIAGRMA GRKVITWKRG RKYKAKNRGN
K