Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4122 |
Symbol | |
ID | 8727881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4969329 |
End bp | 4970054 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388908 |
Protein GI | 284038978 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000002243 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00000977618 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTCTTAA GAACGGCATT AAGACGAGGG CATCACGTAG TTAGCCGAGC CTCATCTAGG AGCTACGGAC AGTCCCTAAA ACCAAGAGCA GAAATGCCTG GTCAACAGGG TGTGCTTCGC AAGAAAGATC CGGCACATGA GTATTGGGAG AAACGCGGGC AGGGAACCTG GAATATAAGC CGGGGAATAC GGGAAGCATT CTGGGGCGTA AAAGGATATA ATATGAGTCA TTTTGTTGTC CCGAAATCAA AAGCCATAGC TGAAGTTCGT CGTGACCCTG CGCGAGCAAA CTGGGATAAG GAACTAAAGA GAATGAGGGT TAAATACCCA CATCTGTCAT TCTTAATTGA CCAATGGCGT TTACAGAATC GGGCTCAGGC CTTAGGGGGA AATCCGCTGC CGGTTAAAGC CGGAAGGATA ATGCTTGAAG GCCTGGAGCG GATGGGTCGT GCAACCACTT TAACAGGAAA ACTCGGAGGG CATTGGTATG CTCAAATTTA TTCGTTAGGA AACGAAGGAT TTAGAGGAGG AGCATCTTAT TTCATGCATG CACTAGCTAT CCCGTGGCAA TGGCCAGGAA TTGCCACCCG GCACTTCTTC AGTAAATATT TCAACATCCC GGAAAATTTC CATCCAATCA GAATAGCTGG TAGAATGGCT GGCCGTAAAG TAATAACATG GAAGAGAGGG AGGAAGTATA AAGCAAAGAA CAGGGGGAAT AAGTAA
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Protein sequence | MFLRTALRRG HHVVSRASSR SYGQSLKPRA EMPGQQGVLR KKDPAHEYWE KRGQGTWNIS RGIREAFWGV KGYNMSHFVV PKSKAIAEVR RDPARANWDK ELKRMRVKYP HLSFLIDQWR LQNRAQALGG NPLPVKAGRI MLEGLERMGR ATTLTGKLGG HWYAQIYSLG NEGFRGGASY FMHALAIPWQ WPGIATRHFF SKYFNIPENF HPIRIAGRMA GRKVITWKRG RKYKAKNRGN K
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