| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4110 |
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| Symbol | |
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| ID | 8727869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4948881 |
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| End bp | 4950137 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | Tetratricopeptide repeat protein |
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| Protein accession | YP_003388896 |
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| Protein GI | 284038966 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0123824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGC TAAGCCAGCG TATATCTGTT CTTGAACGGC TTTGGCAGGA ATTCCGACGG
CTGCCCGATG CCCGCCTGTG CCGTTGGTTA TTTGTCCCCG ACGAACACTG GTTTCTGACT
TTGTTTCTGC AAAAACAGAC CGGCCCGCAG GCGGTCTCCA ACGATATTTT CATCACCCTC
GATACACCCG TTCAGCACTG GCAGACCTTT TTCGAACAGG CACTGGCCGA CCTTTCTGAA
CAGGTCGGCC ACGATCTGCT CCTGCTGGCC GATCAGAACA TTCGCATCCA GTGGCCCCCC
GAAGCCAACG GGGTAAAGCA GGACCCGATC ACCCGCTTTA TCTCGTCTGT CAATCTGCTG
GACACCCGGC TGCGTACCTA TACCGATGGT CTGCTGGTGT TATGCCTGCT GCCCCAGGCC
ACGGCCAGCA ACATAGTGCT GGACCAGATG CTGACGGCCC TGCTGATGGG TGGCCTTTCG
CCAACGGTTC GCATCCTGAT TACGGATACC GTCGGTGCCG AACAACTGGC CACGTTACCC
GGCCGGTTTC GAAAAGAGGT CTGCTCAAAC CCCATTAATC TCCAGCTTCA GAAGGTCATT
CACCAGGTAG CCGCGCTCGG TTCGCCTATG GCACCCGACG TGAAGTTCCG GCAGTGGCAT
GCCGAGCTGA GCACCGCCCT TACCCAGCGA AATTTGCCGG ATGTACTGTA TTTTGCTCGC
AAGTGTGAGC TGATCTGCCA GCAGGAACGC TGGGCAGCTC TTGAGGGTAG CGTTCACTTG
TCTGTCGCCC AGGCCTATAA AGATCACCGA CGGCACGAGG ACGCACTGGA TCGCTACAAA
CGGGTGATTG ACCAAATGGA GCCTCTGTAC GACGCGGGCG ATGCGCTCGC CGGTCGAATC
AGTCTGGTGG CCTGGCTGGG GGCTGGTGAG ATCTATGAAA CCACCCGACA GCGGCAACGG
GCTATTAATG AGTATGAACT GGCCAGTAAT AGGGCCGAAC ATCTGAAAGA GTGGTTACTG
GCAATCGAGA GTCATCGTAG GCTGGCTCTG GCCTATGAAC AGCATGGCCG GAGCCGCCTG
TCCGAAGAGC ATTACCTACG GCTGTTTACA CTGGCCGAAC ACCTACCGCC CGAACAGCAC
GCGGTAGCCC GTTTGCCAGA GATAGGCAGA CAGTACTGGC AGCGACAGCA AACGCCAGAC
AAAAGGCGAA AAGCCGATGA GTTATTAACC CAACTCCTCG GAAACAGACG GTGGTAA
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| Protein sequence | MNPLSQRISV LERLWQEFRR LPDARLCRWL FVPDEHWFLT LFLQKQTGPQ AVSNDIFITL
DTPVQHWQTF FEQALADLSE QVGHDLLLLA DQNIRIQWPP EANGVKQDPI TRFISSVNLL
DTRLRTYTDG LLVLCLLPQA TASNIVLDQM LTALLMGGLS PTVRILITDT VGAEQLATLP
GRFRKEVCSN PINLQLQKVI HQVAALGSPM APDVKFRQWH AELSTALTQR NLPDVLYFAR
KCELICQQER WAALEGSVHL SVAQAYKDHR RHEDALDRYK RVIDQMEPLY DAGDALAGRI
SLVAWLGAGE IYETTRQRQR AINEYELASN RAEHLKEWLL AIESHRRLAL AYEQHGRSRL
SEEHYLRLFT LAEHLPPEQH AVARLPEIGR QYWQRQQTPD KRRKADELLT QLLGNRRW
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