| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4077 |
|---|
| Symbol | |
|---|
| ID | 8727835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4905777 |
|---|
| End bp | 4907111 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003388863 |
|---|
| Protein GI | 284038933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.771769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.484559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAA TTAGGCTCAA CGAATTTAAC CACCAACAAG GCTTGCTAAA CGACCTTCAA
CAGAAAGAAA AACAACTGGC CGTTATCGGG TTGGGCTACG TGGGCCTACC GATAGCGCTG
GCCTTTGCCC AACGGTTTCG GGTGGTGGGC TTCGATACCA ACGCCGAACG GGTGGCTATG
CTGCAACGGC ACGAAGATCC ATCGCGTCAG CTAAAGCCCG GCGATTTTAC CGGGGCCGAT
ATCCGGTTTA CCGCTAATCC CGATGACCTC CGAAACGCCC ATTTTTTTGT TGTGGCGGTG
CCTACACCGG TCGATGAGTA CAAAGTCCCC GATCTGAAAC CCCTGCAACG GGCGTCCGAA
ATCATTGGTC GTGTCCTGAA ACCCGGCGAC TACGTCGTCT ATGAGTCTAC CGTTTACCCC
GGCTGTACCG AAGACGATTG CCTGCCGCTG CTGGAACAGT ATTCCGGCCT GAAGCTGGGT
GATGACTTTA AGCTGGGCTA CTCGCCGGAA CGGATCAACC CCGGCGATAA GGTTCGAACG
CTGACCGATA TACTAAAAGT AGTGTCGGGT AACGATGCCG AAGCAGTGCA GACAATTGCT
GATGTATACG GCAGTATCAT CCGGGCCGGT ATATACGCTG CGACCTCCAT TAAGGTTGCC
GAAGCAGCCA AGGTCATCGA AAATGTTCAG CGGGATCTCA ACATATCGCT GATGAATGAA
TTGGCGGTCA TTTTTGACAA AATGAGTATC GACACGCAGG AGGTACTGAA AGCTGCGTCG
ACGAAATGGA ATTTTTTGCC GTTTACGCCG GGGCTGGTCG GCGGGCATTG TATTGGCATT
GACCCCTATT ACCTTCTTTA CAAATCGCGG CAGCTGGGTT ATGAACCGCA GGTAATCAAC
TCGGGTCGGC GCGTCAACGA CAGTATGCCC GCTTTTGTGG CCACCAAGCT GGTTCAGCTG
TTGCTCCAGC GCGAGAAGAA TCCGGCGCAG ACTAAAGTAC TGGTCATGGG CCTCACATTC
AAGGAAAACA TTGCCGACAT CCGCAACTCG AAAGTAGTCG ACCTGGTGCG GGAGCTGATG
AAATACGCCA TCAACGTTCA TATCGTTGAT CCGTGCGCGT CGCCGAACGA AGTAGCGCTC
GACTACAAAA TGACCCTGCT GGATGCACCG GTCGGCCGGT ACGACGCCGT CATTGTTGCC
GTTGCCCACG ACCAGTATCG CACACTGGAT GTGGTCTATT TTAAGTCGCT GATGACGGAG
CGGCCGATTT TACTGGATTT GAAGGGATTG TATACCATAG GCCGGGAAGA TGATCTAACC
TACTGGCGAT TATAA
|
|---|
| Protein sequence | MFKIRLNEFN HQQGLLNDLQ QKEKQLAVIG LGYVGLPIAL AFAQRFRVVG FDTNAERVAM
LQRHEDPSRQ LKPGDFTGAD IRFTANPDDL RNAHFFVVAV PTPVDEYKVP DLKPLQRASE
IIGRVLKPGD YVVYESTVYP GCTEDDCLPL LEQYSGLKLG DDFKLGYSPE RINPGDKVRT
LTDILKVVSG NDAEAVQTIA DVYGSIIRAG IYAATSIKVA EAAKVIENVQ RDLNISLMNE
LAVIFDKMSI DTQEVLKAAS TKWNFLPFTP GLVGGHCIGI DPYYLLYKSR QLGYEPQVIN
SGRRVNDSMP AFVATKLVQL LLQREKNPAQ TKVLVMGLTF KENIADIRNS KVVDLVRELM
KYAINVHIVD PCASPNEVAL DYKMTLLDAP VGRYDAVIVA VAHDQYRTLD VVYFKSLMTE
RPILLDLKGL YTIGREDDLT YWRL
|
|---|
| |