Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4072 |
Symbol | |
ID | 8727830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4900111 |
End bp | 4901208 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003388858 |
Protein GI | 284038928 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.946495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCGTT ACATACGCTT GTATGGTCTC TCCAGAACGA TTGCCAAAGT GCGGGCGCAC TACCACATGA ATAGGGTGTA TTCCCAAACA TCGTCGCTGC CGGTACCGGC AGGGCCAACC AGGAAGCACG TTGGGATACT TGGCTGCGGG AAATTCGCCT ATGCCAATGT TGCGTATTAT GTACGTCGAC ATTTTGGAGC GGTTATCCGG GGCGTTATGG ACACGGATCT GAACAAAGCA ATTTCGCTGG CGCAGCGTTA CCAGGCAGAT TATTACACGA CTAACGCCGA TGATGTACTG AATGACCCGC ACATCGACCT GATTTACATT GTCTCGAATC ATGCGTCACA TGCCGAATAC GCCATTGCTG CCATTCGGAA AGGCAAAGCC GTTCATATTG AAAAGCCGCA CGTAGTCAAT GCCGATCAGT TGATTCGACT TTGTGCCGCC ATTAACGAGC ATAATGGGCG CGTTCGGTTG GGGTTCAACC GGCCCGAAAG CCCACTGGGT CTGCTGCTTA AACAGCAAAT GGACGCTCAG GCAGGTCCGG CCATGATTAA CTGGTTTGTT GCAGGCCACG CCATTACCCC CGGCCACTGG TATTTTGCGG AGGAAGAAGG CGGGCGAATT CTGGGCAATC TGTGCCACTG GATTGACTTT ACATTACGGT TGATTCCGGT CGCCAGCCGC TATCCCGTTC AGATTATCCC GACGCGTGCC CAGCGGTCCG ACTGCGACAT TAGTGTGTCT TATCTGTTTG GTGATGGCTC CATCGCAACC ATCACTTTTT CGGCGAAAGG GCACACGTTT GAGGGGGTTC GGGAAACGCT GAATGTCCAT AAAGGGAATC TGCTGGCCCA ATTGACCGAC TTCCAGCGTT TACGGCTGGA TATTGGCCCC GTTGTGTGTC ACCGGCGATT ATGGTTTCGG GATCACGGAC ACCGGCGGTC TATTCTTGAT AGTTACTTAA TGCGGGGGGA TAAGTCAAAG CATGAAACGG TGGCAATGAT CCGGGAGACG GGCTGGCTCA TGCTCAAAAC CAGGGAAGCA CTGGAGACAA CGACGGTCAT TACCGTGACG GCCAATTTTT CGCGATAA
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Protein sequence | MARYIRLYGL SRTIAKVRAH YHMNRVYSQT SSLPVPAGPT RKHVGILGCG KFAYANVAYY VRRHFGAVIR GVMDTDLNKA ISLAQRYQAD YYTTNADDVL NDPHIDLIYI VSNHASHAEY AIAAIRKGKA VHIEKPHVVN ADQLIRLCAA INEHNGRVRL GFNRPESPLG LLLKQQMDAQ AGPAMINWFV AGHAITPGHW YFAEEEGGRI LGNLCHWIDF TLRLIPVASR YPVQIIPTRA QRSDCDISVS YLFGDGSIAT ITFSAKGHTF EGVRETLNVH KGNLLAQLTD FQRLRLDIGP VVCHRRLWFR DHGHRRSILD SYLMRGDKSK HETVAMIRET GWLMLKTREA LETTTVITVT ANFSR
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