Gene Slin_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4072 
Symbol 
ID8727830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4900111 
End bp4901208 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content53% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionYP_003388858 
Protein GI284038928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.946495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCGTT ACATACGCTT GTATGGTCTC TCCAGAACGA TTGCCAAAGT GCGGGCGCAC 
TACCACATGA ATAGGGTGTA TTCCCAAACA TCGTCGCTGC CGGTACCGGC AGGGCCAACC
AGGAAGCACG TTGGGATACT TGGCTGCGGG AAATTCGCCT ATGCCAATGT TGCGTATTAT
GTACGTCGAC ATTTTGGAGC GGTTATCCGG GGCGTTATGG ACACGGATCT GAACAAAGCA
ATTTCGCTGG CGCAGCGTTA CCAGGCAGAT TATTACACGA CTAACGCCGA TGATGTACTG
AATGACCCGC ACATCGACCT GATTTACATT GTCTCGAATC ATGCGTCACA TGCCGAATAC
GCCATTGCTG CCATTCGGAA AGGCAAAGCC GTTCATATTG AAAAGCCGCA CGTAGTCAAT
GCCGATCAGT TGATTCGACT TTGTGCCGCC ATTAACGAGC ATAATGGGCG CGTTCGGTTG
GGGTTCAACC GGCCCGAAAG CCCACTGGGT CTGCTGCTTA AACAGCAAAT GGACGCTCAG
GCAGGTCCGG CCATGATTAA CTGGTTTGTT GCAGGCCACG CCATTACCCC CGGCCACTGG
TATTTTGCGG AGGAAGAAGG CGGGCGAATT CTGGGCAATC TGTGCCACTG GATTGACTTT
ACATTACGGT TGATTCCGGT CGCCAGCCGC TATCCCGTTC AGATTATCCC GACGCGTGCC
CAGCGGTCCG ACTGCGACAT TAGTGTGTCT TATCTGTTTG GTGATGGCTC CATCGCAACC
ATCACTTTTT CGGCGAAAGG GCACACGTTT GAGGGGGTTC GGGAAACGCT GAATGTCCAT
AAAGGGAATC TGCTGGCCCA ATTGACCGAC TTCCAGCGTT TACGGCTGGA TATTGGCCCC
GTTGTGTGTC ACCGGCGATT ATGGTTTCGG GATCACGGAC ACCGGCGGTC TATTCTTGAT
AGTTACTTAA TGCGGGGGGA TAAGTCAAAG CATGAAACGG TGGCAATGAT CCGGGAGACG
GGCTGGCTCA TGCTCAAAAC CAGGGAAGCA CTGGAGACAA CGACGGTCAT TACCGTGACG
GCCAATTTTT CGCGATAA
 
Protein sequence
MARYIRLYGL SRTIAKVRAH YHMNRVYSQT SSLPVPAGPT RKHVGILGCG KFAYANVAYY 
VRRHFGAVIR GVMDTDLNKA ISLAQRYQAD YYTTNADDVL NDPHIDLIYI VSNHASHAEY
AIAAIRKGKA VHIEKPHVVN ADQLIRLCAA INEHNGRVRL GFNRPESPLG LLLKQQMDAQ
AGPAMINWFV AGHAITPGHW YFAEEEGGRI LGNLCHWIDF TLRLIPVASR YPVQIIPTRA
QRSDCDISVS YLFGDGSIAT ITFSAKGHTF EGVRETLNVH KGNLLAQLTD FQRLRLDIGP
VVCHRRLWFR DHGHRRSILD SYLMRGDKSK HETVAMIRET GWLMLKTREA LETTTVITVT
ANFSR