Gene Slin_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4071 
Symbol 
ID8727829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4898985 
End bp4900091 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content54% 
IMG OID 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_003388857 
Protein GI284038927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA TCAGTGTCAT TGGCACCCGG CCTAATTTTG TGAAAGTGGC TCCGCTTCAC 
CGTGCCCTGC TGACAAAACC GGGTGTTGTC CCGAAACTCG TTCATACGGG TCAACATTAC
GACGGTCGGT TAAACGACGT TTTTGTTCGG CAACTCAATC TACCTCCACC AGACTACTGC
CTGGATGTTG CTGCCGGAAC CATACCCCAA CAGACGGCCG GGATTATCCA AAAATTCGAA
GGGGTACTCC GGGCTGAACA GCCCGATTGG GTGCTGGTTG TAGGCGATGT GACGAGTACG
CTGGCTTGTG CGCTTACGGC CGTTCAGCTG GGAGTTCGGG TGGCCCATGT AGAAGCTGGT
CTGCGCTCCG GCGACCGCCA AATGCCCGAA GAAATCAACC GGATACTGGT CGATTCCATG
GCTGATTTGC TTTTTGTGAC GGAACAGGCC GGGTTCGATA ACCTGCTCCG CGAGGGTATT
CCGGCCCATA AAATTCATTT TGCCGGTAAC GTGATGATTG ATTCGCTGGT GGAGCATCGG
CAAAAAGCCA ATGCGTTGAA TACCGTTGGC ACACTCAGTC TGACGCCCAA ACGGTACGCT
CTGCTAACCA TGCACCGCCC GGCCAATGTC GATACCGAAG CGGGGTTAAA CCGGCTTTTA
TACCTGATGA AACAAACGGC GCAGCACCTG ACAGTAGTGT TTCCTGTTCA TCCGAGAACC
CACGCCAATC TGGAGAAATT TGGCATGATG CCTGAGTTGA TGGCTCTTGA AAACGTCCGG
CTACTTGCTC CGCAGGGGTA TCTGGAGTTC CTGAACCTGA TGGAGCAGGC GGCCGTTGTC
GTCACCGATT CGGGCGGCAT CCAGGAAGAA ACGACCTACC TGAACGTACC CTGCCTAACC
TTTCGAACCT CAACCGAGCG ACCCGTAACC ATCGAGCTGG GCACCAACCA GCTGGTGCCC
GACTTAAATC CCGTAACTGT CGGCCAAAAA GTGGCGGCTA TCCTGAATGG TCGGGTTAAA
GCGGGTAAGG TGCCCCCATT ATGGGATGGT AAAACCGCTG ATCGAATCGT GAATATACTA
ACTACCGCCA GTCAGGTAAT TCCATGA
 
Protein sequence
MKIISVIGTR PNFVKVAPLH RALLTKPGVV PKLVHTGQHY DGRLNDVFVR QLNLPPPDYC 
LDVAAGTIPQ QTAGIIQKFE GVLRAEQPDW VLVVGDVTST LACALTAVQL GVRVAHVEAG
LRSGDRQMPE EINRILVDSM ADLLFVTEQA GFDNLLREGI PAHKIHFAGN VMIDSLVEHR
QKANALNTVG TLSLTPKRYA LLTMHRPANV DTEAGLNRLL YLMKQTAQHL TVVFPVHPRT
HANLEKFGMM PELMALENVR LLAPQGYLEF LNLMEQAAVV VTDSGGIQEE TTYLNVPCLT
FRTSTERPVT IELGTNQLVP DLNPVTVGQK VAAILNGRVK AGKVPPLWDG KTADRIVNIL
TTASQVIP