Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4069 |
Symbol | |
ID | 8727827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4895150 |
End bp | 4896787 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Heparinase II/III family protein |
Protein accession | YP_003388855 |
Protein GI | 284038925 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC CGGGCTTGGT CTGGCGAACG GTACGTCACC TGACGATGCG GCAGATGGTT TTCCAACTGC TGAGCCGTAT CCGTACCCGC CCGCGGCTGC GTTTTTCGAA AATTACTCCC GCAACTTATT TCCTGACCGT GCCCGAGGCT GCCAAACCGG TAACCTACAG GGCCGGGGTG TTCACACTGT TGAACCGTAC GTATGCGCCG GAAACCGGCG CCATCGACTG GAACGGGCGG CATCCGGAAA CCGCCGGTTA CGGCAAACTC TGGACGTACC ATCTCAACTA TTTCGATTTT CTGAATCAGC CAGGCTTATT GCCGAAAACT GGTCTTGCGC TGATCCATGA CTTTATCTAC CAGTCCGGCT CATTGCGGGA CGGACTGGAG CCGTATCCTA CCTCGCTGCG GGTTATGAAC TGGATTCAGT TCCTGAGCCG TCATCAGCTT CAGGATAAGA CCATCAGTCG GCATCTGGTG GCTCAGATGG AGCTGGTGAG TCGTCGGGTG GAGTACCACA TTGGCGGAAA TCATCTGCTC GAAAATGGGT TTTCGTTACT TCTGGGTGCT TTGTATTACC GGAACAAGCG GTGGTTCGCG AAAGGGTCGG TGCTTGTTCA GGCTGAATTA CGGACGCAGA TTCTGGCCGA TGGCGGGCAT TACGAGCGCA GCCCTATGTA CCATCAAGTA CTGCTCGATC AGTTATTGAC CGTTCTACTG GCGTTACAGG CTGACGACTG GCATCGTGGC CAGAACGCAA CCTTCGCTGA CTTTCTGGCC AGAAAAGCCC ATCAAATGAG TAGCTGGCTT GACAGTATCA CGTTCCGTAA TGGCGACGTT CCGATGGTCA GTGATTCGGC GTTCGGGATT GCTCCTGCAA CGAACCAGCT ACGGAAGAAA GCGGCCGGTC TTTGGCCCGT GACGCACAAC TGCGGGATAG AAATGGGGAA TTCCGGGAAA CAAAAATCGA CGGATACCGG CTATCGGATG TTTCGACAGG ATCGCTACGA GCTTTGCGTG GACGTTGGCT CCGTTGGCCC ATCTGAGCAG CCCGGTCATG CCCACGCCGA CACCTTCTCC TTTGTCCTGT ATGCTGATGG TGTGCCGCTG ATCGTGGATA GTGCCACGTC GACGTATGAG CTGGGGCCAC GGCGGGCCTG GGAGCGGAGT ACGGCGGCTC ATAATACCGT TGAGGTAAAC GGGATTAATT CATCCGAAGT CTGGGCGAGC TTTCGGGTAG GCCGACGGGC TCGGGTAATA ATTCTGTATG ATGCCCCTGA TCGTCTCACC GCCCGGCATG ATGGGTATCG GCACCTCGGG CTGATTCACG AACGGGCCTG GTCGATGGAG CCGACCGGTA TTACGATTAG CGATCAACTG TTGAGCCTTC ATAAAAGCCC CAGCCACGTG CCCACCGGGG TGGCCCGGTT TCATGTTCAT CCGGCGGCTA CCGTGCAGAT TACGGGTCAA ATCGTGCGTG TAGACGGCTG GATGCTGGCG TTTGTATCCG AGGCTGAACG ACTTATATCG CTGGAAAGCT ACGCGATGGC AGAGGGATTT AATCAGTTGC AGCCTGGCTA CTGCATCCGG GTCGACTTTC GCGGGAATCT GAAAACTGCC CTTACCCTTG TCCAATGA
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Protein sequence | MNKPGLVWRT VRHLTMRQMV FQLLSRIRTR PRLRFSKITP ATYFLTVPEA AKPVTYRAGV FTLLNRTYAP ETGAIDWNGR HPETAGYGKL WTYHLNYFDF LNQPGLLPKT GLALIHDFIY QSGSLRDGLE PYPTSLRVMN WIQFLSRHQL QDKTISRHLV AQMELVSRRV EYHIGGNHLL ENGFSLLLGA LYYRNKRWFA KGSVLVQAEL RTQILADGGH YERSPMYHQV LLDQLLTVLL ALQADDWHRG QNATFADFLA RKAHQMSSWL DSITFRNGDV PMVSDSAFGI APATNQLRKK AAGLWPVTHN CGIEMGNSGK QKSTDTGYRM FRQDRYELCV DVGSVGPSEQ PGHAHADTFS FVLYADGVPL IVDSATSTYE LGPRRAWERS TAAHNTVEVN GINSSEVWAS FRVGRRARVI ILYDAPDRLT ARHDGYRHLG LIHERAWSME PTGITISDQL LSLHKSPSHV PTGVARFHVH PAATVQITGQ IVRVDGWMLA FVSEAERLIS LESYAMAEGF NQLQPGYCIR VDFRGNLKTA LTLVQ
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