Gene Slin_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4067 
Symbol 
ID8727825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4892946 
End bp4893941 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content52% 
IMG OID 
ProductUDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase-like protein 
Protein accessionYP_003388853 
Protein GI284038923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTA CCGGGTATTT CTTGCTGACG ATAGCACTGG TTCTAATCGA GTGGCTTTAT 
GTGCGGCTGG CCCGTCGGTA TGCGTTTTTC GAGAAGCTCA ATGAGCGCAG TATGCACCAG
CACCCAACGA CAGTCCGCGC CGGTGGATTT ATCTTTTATT TGGCTGCGCT GGCTGCTGTC
TGGCAACATG ATACTCTTTT TTATTTCTGC CTTGGGTTGA CAAGTTTAGC ACTCGTATGC
TTTGGGGACG ATTGGGTCGA CCTGCCCAAA CGCTATCGAC TCGCTGTGCA ATTACTGGCA
GTAGGGTTGA TGCTTGGTCA ACAGGGCCTG CTGGCCAGTC ACTGGTATAT CGCCGTTGCG
TTACTGGTTG TGGGCGTTGG GCTGTTGAAC GCGTATAATT TCATGGATGG CGTCAATGGT
ATGACCGCCT TTTGCGGCCT TGTTGCCGTT GGTACGCTCT GGTTCGTAGA AGGGCAGCTC
CTGGGTGCAA CGAATGCCCT ATTCCCCTGC GTGCTGATCG CCCTGCTTGT GTTCAGTTAT
GTAAATGCCC GACCGCAGGC CATTTGCTTC GCGGGCGATG TCGGGAGTGT TTCAATGGGA
TTTATTGTGC TGTACGGCAT CGTCGACTGC GTTAGCCGCA GTCATTCCTG GCTGCCCGTG
CTGTTCATTG CTGTATACGG GATGGATAGT GGGCTGACAA TTCTTTACCG CCTTTATCTT
GGGCAGAATA TTGTTCAACC GCACCGGATG CATCTGTATC AGGTACTGGT CAGTTCCCGG
CGGTGGTCGC ATCTGCACGT CTCGGCTTTG TACGCGTGCG TTCAGCTTTT TATTAACGGG
CTTATCATTG TCATGCTCAC AAAGCCGCCG ATGACGCAAC TGCTCATGTT TTGCGTAGTT
GTGGGTTGTC TAAGTGCAGG ATATGTTCTA GCCCGGATTC AGCTTGGCAA CGGCACAAAA
AAGCGGGTTG GCTTCGAAAA ACCAACCCGC TTGTAG
 
Protein sequence
MSLTGYFLLT IALVLIEWLY VRLARRYAFF EKLNERSMHQ HPTTVRAGGF IFYLAALAAV 
WQHDTLFYFC LGLTSLALVC FGDDWVDLPK RYRLAVQLLA VGLMLGQQGL LASHWYIAVA
LLVVGVGLLN AYNFMDGVNG MTAFCGLVAV GTLWFVEGQL LGATNALFPC VLIALLVFSY
VNARPQAICF AGDVGSVSMG FIVLYGIVDC VSRSHSWLPV LFIAVYGMDS GLTILYRLYL
GQNIVQPHRM HLYQVLVSSR RWSHLHVSAL YACVQLFING LIIVMLTKPP MTQLLMFCVV
VGCLSAGYVL ARIQLGNGTK KRVGFEKPTR L