| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4063 |
|---|
| Symbol | |
|---|
| ID | 8727821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4889217 |
|---|
| End bp | 4890683 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_003388849 |
|---|
| Protein GI | 284038919 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.910781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATT TTGCCCAATT TTCCCGTCCC ATGTCAAAGA AAACCAAGAT TGTGGCCACT
ATTGGTCCGG CTTCCGAAAC GAAAGAACAG TTGCTGGCAC TAGCCAAAGC AGGTGTAAAC
GTTTTCCGAC TCAATTTCTC CCACGGCACC CACGAAGATC ACCTGATGCG GCTGACCCGC
ATCCGCGAGC TGAATGCAGA ATACAACCTC CACCTGTGCA TATTACAGGA TTTACAGGGG
CCAAAAATCC GCATTGGTAA TGTTGAAAGT AAAGACGGTG TCACGATCGT TGCCGGTCAG
GAACTCGTCT TCACCAACGA CGATATCATT GGTACCGCCG AACGTGTTAG TACACCGTAC
AAAAACATGT ACCGCGATGT GCACCCCGGC GAACGGATTT TGATGGACGA TGGCAAATTA
GAGGTCCGTG TTCTTCGGAA AGAAGGTACC GATGTTGTTA CGGAAGTCGT TTACGGTGGC
TCTATGAAGT CCAAAAAAGG CGTAAACCTG CCTAACACAA AAGTATCGAT GCCCGCCGTT
ACCGAAAAAG ACTGGGCCGA TCTGGAGTTT GGTCTCGAAA ACGACGCCGA ATGGATTGCG
CTTTCGTTTG TTCGGGAAGC GTCCGAAATC ATCGAAATCA AAGAATACAT CAAGTCAAAG
GGCAAGAAAA GCCGCGTTAT CGCGAAAATT GAAAAGCCCG AGGCTATTCA GAATATCGAC
GAAATCATTG CTGCTACGGA CGGGCTCATG GTAGCCCGCG GTGACCTCGG CGTTGAGTTA
CCTGCCGAAG AGGTACCGAT GATTCAGAAG ATGCTCGTTG AGAAGTGCAA CCGGGCCGCC
AAGCCGGTTA TTGTGGCTAC GCAGATGCTG GAAAGCATGA TCGACGCCCC TCGTCCTACG
CGCGCTGAAA TCAATGACAT TGCCAACTCG GTAATGGATG GCGCAGATGC TGTTATGCTG
AGTGCTGAAA CGGCGTCGGG TAAATACCCG GTTCTGGCGG TTGAGAGCAT GGCCAACACC
ATTCGGCAGG TTGAGCAATC GACAGATAAA ATTTACTATC GCTACCACGC CCAGGTGAAT
GAGCAGCCGA GCGAGAACGT CATCAACGAC AATGTGGTGA TGAGTGCCTG CCGACTGGCA
CGTGATACGA AAGCAAAGGC AATTATTGGC ATTACCAACT CCGGCTACAC AGCGGTACGG
CTGTCGCACC ACCGCCCCAA AGCCGATCTG TTTGTGTTCT CCAATGACGC TCAACTGCGG
AACACACTGG GCCTTTACTG GGGTGTTCAG GTAATTCCTT ACGAGCCAGA CTTAAACTTA
ACCATCGACC AGACGGTAGA AGGTATCAAA CAAACACTCG TTGGACAGGG TCAACTGAAT
TCGGGCGATA TTTTCATTAA TACGCTTAGT ATGCCCCTCA CTCAGGCCCG CCGGACAAAT
ACGGTGAAAT TGAGTACGGT AGATTAG
|
|---|
| Protein sequence | MADFAQFSRP MSKKTKIVAT IGPASETKEQ LLALAKAGVN VFRLNFSHGT HEDHLMRLTR
IRELNAEYNL HLCILQDLQG PKIRIGNVES KDGVTIVAGQ ELVFTNDDII GTAERVSTPY
KNMYRDVHPG ERILMDDGKL EVRVLRKEGT DVVTEVVYGG SMKSKKGVNL PNTKVSMPAV
TEKDWADLEF GLENDAEWIA LSFVREASEI IEIKEYIKSK GKKSRVIAKI EKPEAIQNID
EIIAATDGLM VARGDLGVEL PAEEVPMIQK MLVEKCNRAA KPVIVATQML ESMIDAPRPT
RAEINDIANS VMDGADAVML SAETASGKYP VLAVESMANT IRQVEQSTDK IYYRYHAQVN
EQPSENVIND NVVMSACRLA RDTKAKAIIG ITNSGYTAVR LSHHRPKADL FVFSNDAQLR
NTLGLYWGVQ VIPYEPDLNL TIDQTVEGIK QTLVGQGQLN SGDIFINTLS MPLTQARRTN
TVKLSTVD
|
|---|
| |