Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4062 |
Symbol | |
ID | 8727820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4886727 |
End bp | 4889141 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | primosomal protein N' |
Protein accession | YP_003388848 |
Protein GI | 284038918 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.172877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGACG GGCTCAAAAT TGGTGCCAGA GTTATCGTGC CATTCGGCAA AAAAAACGGC AGAGTCTTTA CTGCCATCGT GGCAAAGCTG CATAATACCC CCCCAACCGG CTATCAGGCA CGTTACATCA ATGAGACCCT GGATGAGTAC CCTTTAACCA CAAGTTACCA GCTAGAACTT TTTAGATGGA TTGCAGACTA TTACATGTGC TGCATCGGTG AGGTCATGAA TGTGGCGCTT CCATCAGGAT TAAAGATTTC CAGTCAGTCC AAAGTGCAGT TCAATCCCGA TTTCAGCTAC CCCGAACTGC TCACCGAATT GGAGGAAACC CTGCTTACCG AACTCAAAAA ACACCCGGCT TTATCATACG ATGAAGTGGG GCGCCTGGCT GGCGACGGGG TTAATGTAGC GGCTCTGATT AAATCGCTGG TCGAAAAAAA GGCCATTATC GTCTTTGAAG AAGTCCGGGA AAAATACACA CCTAAAATGG TACGGAAGAT TCGTCTTCAC CGGAATTACG AGAAGCGCGA ACAACTGCTT GTTTTGCTGC AACGGCTCGA AAAACTGCCC AAACAGCAGG AAGTCGTTAT GCGGTACCTG AGCCATGTTC CCCTACAACG GACACCGGCC TTGAATGAAA AGGGGCTTGA CAAAACCATT CTGAACCAGG ACGATGAGCT ATCACAATCG TCGCTGGCCA CGCTGCTCAA AAATCAGGTT TTCGAAACAT TCGATGTTAT CCAGCCCCGC TTTTCGGACA ATGGGTCGCC CGATGGTTTA CAAACCGAGA TCAAGCTAAC CGATGCCCAG CGGACGGCTT CGAACCAGAT CATGGCGCAG TTCGACCAGC ATAACGTTGT TCTTCTGCAC GGCATCACCG GCAGTGGTAA GACGGAAGTC TATATTGATC TAATTCAGCA GGCCCTTGGC AGTGGCTCTC AGGTGCTCTA TCTCCTCCCC GAAATTGCCC TTACCACCCA GATCGTTGTG CGTCTACAAC GGGTATTTGG GGATAAAATG GGGATTTATC ACTCCAAATT TTCGGATAAC GAACGTGTGG AGGTCTGGAA AGGGGTTGTT TCGGGACAGT ATCAGTTCGT GGTGGGTGTG CGCTCAGCAG TGTTTTTGCC GTTCGATAAC CTGGGGCTGA TCATCGTGGA TGAAGAGCAC GAAACCAGCT ATAAACAACA CGATCCAGCT CCACGCTACC ATGCCCGCGA TGTAGCCATT ATGCTGGCGC ACTGGCAGCA GGCCAAGGTA TTGCTGGGTT CGGCCACGCC CTCGCTCGAA ACGTATTATC AGGCCAAACA GGGTCGATAC GGACTGGTGG AATTATTTCA ACGCTTTGGC GATGCTACCC TGCCCAACAT CATGCTGGTG AACATGCAGC AGGAGAAAAA GCAGAAGACG CTGAGAAATG AGTTCTCGTC GGTGTTGCTG GGGGCTCTTG AAGCCAACAT GGAGCGTAAA GAGCAAAGTA TCCTGTTTCA AAACCGCCGG GGGTATTCGC CTTACATGCA ATGCGAAGAT TGCGACTGGA CCGCCGAGTG CCCCAACTGC GCCGTTAGCT TAACCTACCA CCAGCGTGAT GCCGAGTTGC GCTGCCATTA TTGTGGTCAT AAAGAAGGAG TGCCGCGTAT GTGCCCCACC TGCGGGTCTA CCAAGGTGAA GACCATCGGC TTTGGTACGG AAAAGCTGGA AGATCAACTC CAGATTTTCT TTCCGCAGTC GCGGGTGCTG CGTATGGACC TGGACACTAC CCGCGCTAAA AACGCCTATC AGCAGATCAT TCAGGAGTTT GAGGGCGGGC AGGTCGATAT TCTGGTAGGT ACGCAAATGA TTACCAAAGG GCTGGACTTC GACAATGTCA GCCTCGTGGG TATTTTCGAC GCCGACCGGC TTATCCATTT TCCTGATTTC CGGGCTACCG AACGAGCGTT TCAGATGATT ACACAAGTAA GTGGTCGGGC GGGGCGACGG GCGGGGCGTC AGGGAACGGT ATTGATCCAG ACCAGCAATC CACAGCAGCC GATCCTGCAA AAAGTAATCG ACAACGACTA TAAAGGGCTG TTTACGGAGG AGCTTCAGGA ACGGCAGGAT TTTAATTACC CGCCTTTTTC ACGGCTCATC AAGCTAACGG TTCGCCATAC CGACCGGGCT ATTAGCCACC AGGCCGCCGA GCGACTGGCC GCCGAGCTGG TCGACGCGCT GGGGAGCAGC CGGGTGCTGG GGCCTGAAGA ACCGCTGGTT GAGCGAATCC GAAACCAGTT TCTGTTCGAT ATTCTAATTA AGATCGAACG CGACAAAGTG AACATAAAAG CCGTGAAGAC GTACATTCAG GATCGCATCA ACGACATCCT CACGGATAAA GGATTACGTC AGGTCAGCAT CGTAGCCGAT GTGGATTGTT TGTGA
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Protein sequence | MADGLKIGAR VIVPFGKKNG RVFTAIVAKL HNTPPTGYQA RYINETLDEY PLTTSYQLEL FRWIADYYMC CIGEVMNVAL PSGLKISSQS KVQFNPDFSY PELLTELEET LLTELKKHPA LSYDEVGRLA GDGVNVAALI KSLVEKKAII VFEEVREKYT PKMVRKIRLH RNYEKREQLL VLLQRLEKLP KQQEVVMRYL SHVPLQRTPA LNEKGLDKTI LNQDDELSQS SLATLLKNQV FETFDVIQPR FSDNGSPDGL QTEIKLTDAQ RTASNQIMAQ FDQHNVVLLH GITGSGKTEV YIDLIQQALG SGSQVLYLLP EIALTTQIVV RLQRVFGDKM GIYHSKFSDN ERVEVWKGVV SGQYQFVVGV RSAVFLPFDN LGLIIVDEEH ETSYKQHDPA PRYHARDVAI MLAHWQQAKV LLGSATPSLE TYYQAKQGRY GLVELFQRFG DATLPNIMLV NMQQEKKQKT LRNEFSSVLL GALEANMERK EQSILFQNRR GYSPYMQCED CDWTAECPNC AVSLTYHQRD AELRCHYCGH KEGVPRMCPT CGSTKVKTIG FGTEKLEDQL QIFFPQSRVL RMDLDTTRAK NAYQQIIQEF EGGQVDILVG TQMITKGLDF DNVSLVGIFD ADRLIHFPDF RATERAFQMI TQVSGRAGRR AGRQGTVLIQ TSNPQQPILQ KVIDNDYKGL FTEELQERQD FNYPPFSRLI KLTVRHTDRA ISHQAAERLA AELVDALGSS RVLGPEEPLV ERIRNQFLFD ILIKIERDKV NIKAVKTYIQ DRINDILTDK GLRQVSIVAD VDCL
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