Gene Slin_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4062 
Symbol 
ID8727820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4886727 
End bp4889141 
Gene Length2415 bp 
Protein Length804 aa 
Translation table11 
GC content52% 
IMG OID 
Productprimosomal protein N' 
Protein accessionYP_003388848 
Protein GI284038918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.172877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG GGCTCAAAAT TGGTGCCAGA GTTATCGTGC CATTCGGCAA AAAAAACGGC 
AGAGTCTTTA CTGCCATCGT GGCAAAGCTG CATAATACCC CCCCAACCGG CTATCAGGCA
CGTTACATCA ATGAGACCCT GGATGAGTAC CCTTTAACCA CAAGTTACCA GCTAGAACTT
TTTAGATGGA TTGCAGACTA TTACATGTGC TGCATCGGTG AGGTCATGAA TGTGGCGCTT
CCATCAGGAT TAAAGATTTC CAGTCAGTCC AAAGTGCAGT TCAATCCCGA TTTCAGCTAC
CCCGAACTGC TCACCGAATT GGAGGAAACC CTGCTTACCG AACTCAAAAA ACACCCGGCT
TTATCATACG ATGAAGTGGG GCGCCTGGCT GGCGACGGGG TTAATGTAGC GGCTCTGATT
AAATCGCTGG TCGAAAAAAA GGCCATTATC GTCTTTGAAG AAGTCCGGGA AAAATACACA
CCTAAAATGG TACGGAAGAT TCGTCTTCAC CGGAATTACG AGAAGCGCGA ACAACTGCTT
GTTTTGCTGC AACGGCTCGA AAAACTGCCC AAACAGCAGG AAGTCGTTAT GCGGTACCTG
AGCCATGTTC CCCTACAACG GACACCGGCC TTGAATGAAA AGGGGCTTGA CAAAACCATT
CTGAACCAGG ACGATGAGCT ATCACAATCG TCGCTGGCCA CGCTGCTCAA AAATCAGGTT
TTCGAAACAT TCGATGTTAT CCAGCCCCGC TTTTCGGACA ATGGGTCGCC CGATGGTTTA
CAAACCGAGA TCAAGCTAAC CGATGCCCAG CGGACGGCTT CGAACCAGAT CATGGCGCAG
TTCGACCAGC ATAACGTTGT TCTTCTGCAC GGCATCACCG GCAGTGGTAA GACGGAAGTC
TATATTGATC TAATTCAGCA GGCCCTTGGC AGTGGCTCTC AGGTGCTCTA TCTCCTCCCC
GAAATTGCCC TTACCACCCA GATCGTTGTG CGTCTACAAC GGGTATTTGG GGATAAAATG
GGGATTTATC ACTCCAAATT TTCGGATAAC GAACGTGTGG AGGTCTGGAA AGGGGTTGTT
TCGGGACAGT ATCAGTTCGT GGTGGGTGTG CGCTCAGCAG TGTTTTTGCC GTTCGATAAC
CTGGGGCTGA TCATCGTGGA TGAAGAGCAC GAAACCAGCT ATAAACAACA CGATCCAGCT
CCACGCTACC ATGCCCGCGA TGTAGCCATT ATGCTGGCGC ACTGGCAGCA GGCCAAGGTA
TTGCTGGGTT CGGCCACGCC CTCGCTCGAA ACGTATTATC AGGCCAAACA GGGTCGATAC
GGACTGGTGG AATTATTTCA ACGCTTTGGC GATGCTACCC TGCCCAACAT CATGCTGGTG
AACATGCAGC AGGAGAAAAA GCAGAAGACG CTGAGAAATG AGTTCTCGTC GGTGTTGCTG
GGGGCTCTTG AAGCCAACAT GGAGCGTAAA GAGCAAAGTA TCCTGTTTCA AAACCGCCGG
GGGTATTCGC CTTACATGCA ATGCGAAGAT TGCGACTGGA CCGCCGAGTG CCCCAACTGC
GCCGTTAGCT TAACCTACCA CCAGCGTGAT GCCGAGTTGC GCTGCCATTA TTGTGGTCAT
AAAGAAGGAG TGCCGCGTAT GTGCCCCACC TGCGGGTCTA CCAAGGTGAA GACCATCGGC
TTTGGTACGG AAAAGCTGGA AGATCAACTC CAGATTTTCT TTCCGCAGTC GCGGGTGCTG
CGTATGGACC TGGACACTAC CCGCGCTAAA AACGCCTATC AGCAGATCAT TCAGGAGTTT
GAGGGCGGGC AGGTCGATAT TCTGGTAGGT ACGCAAATGA TTACCAAAGG GCTGGACTTC
GACAATGTCA GCCTCGTGGG TATTTTCGAC GCCGACCGGC TTATCCATTT TCCTGATTTC
CGGGCTACCG AACGAGCGTT TCAGATGATT ACACAAGTAA GTGGTCGGGC GGGGCGACGG
GCGGGGCGTC AGGGAACGGT ATTGATCCAG ACCAGCAATC CACAGCAGCC GATCCTGCAA
AAAGTAATCG ACAACGACTA TAAAGGGCTG TTTACGGAGG AGCTTCAGGA ACGGCAGGAT
TTTAATTACC CGCCTTTTTC ACGGCTCATC AAGCTAACGG TTCGCCATAC CGACCGGGCT
ATTAGCCACC AGGCCGCCGA GCGACTGGCC GCCGAGCTGG TCGACGCGCT GGGGAGCAGC
CGGGTGCTGG GGCCTGAAGA ACCGCTGGTT GAGCGAATCC GAAACCAGTT TCTGTTCGAT
ATTCTAATTA AGATCGAACG CGACAAAGTG AACATAAAAG CCGTGAAGAC GTACATTCAG
GATCGCATCA ACGACATCCT CACGGATAAA GGATTACGTC AGGTCAGCAT CGTAGCCGAT
GTGGATTGTT TGTGA
 
Protein sequence
MADGLKIGAR VIVPFGKKNG RVFTAIVAKL HNTPPTGYQA RYINETLDEY PLTTSYQLEL 
FRWIADYYMC CIGEVMNVAL PSGLKISSQS KVQFNPDFSY PELLTELEET LLTELKKHPA
LSYDEVGRLA GDGVNVAALI KSLVEKKAII VFEEVREKYT PKMVRKIRLH RNYEKREQLL
VLLQRLEKLP KQQEVVMRYL SHVPLQRTPA LNEKGLDKTI LNQDDELSQS SLATLLKNQV
FETFDVIQPR FSDNGSPDGL QTEIKLTDAQ RTASNQIMAQ FDQHNVVLLH GITGSGKTEV
YIDLIQQALG SGSQVLYLLP EIALTTQIVV RLQRVFGDKM GIYHSKFSDN ERVEVWKGVV
SGQYQFVVGV RSAVFLPFDN LGLIIVDEEH ETSYKQHDPA PRYHARDVAI MLAHWQQAKV
LLGSATPSLE TYYQAKQGRY GLVELFQRFG DATLPNIMLV NMQQEKKQKT LRNEFSSVLL
GALEANMERK EQSILFQNRR GYSPYMQCED CDWTAECPNC AVSLTYHQRD AELRCHYCGH
KEGVPRMCPT CGSTKVKTIG FGTEKLEDQL QIFFPQSRVL RMDLDTTRAK NAYQQIIQEF
EGGQVDILVG TQMITKGLDF DNVSLVGIFD ADRLIHFPDF RATERAFQMI TQVSGRAGRR
AGRQGTVLIQ TSNPQQPILQ KVIDNDYKGL FTEELQERQD FNYPPFSRLI KLTVRHTDRA
ISHQAAERLA AELVDALGSS RVLGPEEPLV ERIRNQFLFD ILIKIERDKV NIKAVKTYIQ
DRINDILTDK GLRQVSIVAD VDCL