Gene Slin_4033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4033 
Symbol 
ID8727791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4847552 
End bp4849774 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content55% 
IMG OID 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 
Protein accessionYP_003388822 
Protein GI284038892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00327636 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAT TCGCAGTCAA TTCCGTGTCG ATGGGAGACC CGATGAGCCG GGTTGATGGC 
CGGTTGAAAG TGACTGGGAG CGCTAAATAC GCGGCCGAAT ACAACCTGCC GGGTGTCACG
TTCGGCGTAC TGGTGACCAG TACAATTGCC AAAGGCCGTA TTGTCGGCAT GAACACGAAG
ACTGCCGAAA AAGTAGCCGG TGTCCTTGGC GTTTTGACCC ATAAGAATGC GCCTAAAGTG
CCCGGCTACG AGGCTGGTAC GGATAATGCA AGCTCCCGCG TATATGGCCA GGAATTTCGC
GTCTTTTACG ACGACCGCAT CTATTTCAAT AATCAGCCGG TGGCGCTGGT GATTGCCGAT
ACACTTGAAC GGGCTACCTA TGCGGCTTCG CTGGTAACGG TAGCGTATCA GCCAGAGCCG
CATCAAACTG ATACAAAGGT CAATCTCGAC AAGGCTATCA AACCCGAACG TTCGGAAGAT
TATTCGCGGG GTATCTCCAA CGCCTACAAA ACGGCACCGG TTACCGTCGA GCAAACGTAC
CACACGCCGG TACACGTGCA TAACCCCATT GAACCCCATG CCGCAACGGC TGTTTGGGAG
AGCGAGGATA AACTGATCGT TTACAACAAG TCGCAGGGGG TGAAGCTGGC GCAGAAAGAT
CTGATGAAAG CCTTCAATCT CAAGGAAGAG AACATTCAGG TTTATTCGCC ATTTGTAGGT
GGCGCATTCG GCAGTTCGTC GCGCATCTGG CCGCAGGAAA TGGCAGCTAT TTTGGGCGCT
AAACTCGTGG GGCATCCGGT AAAAGTGGCC CTCAAACGCG AACAGCAGTT CAATATGGTG
GGTTACCGGC CCCGGTCGAT TCAAAAAATG GGACTCGGCG CTACCGCCGA CGGGACACTG
GTGGGCATCA CGCACGAAGC CTACGGACTG ACCTCTACCT ACGAACAGTT TACCGAGCGT
ATTCTGCACC CTACCAAGTC GTCCTATCGC TGCCCCAACC TGACCGCCGT TTATCGACTC
GTCCCGCTCG ATGTCAGCAC GCCCTGCTGG ACGCGCGGCC CTGGCGAAAC CAGCGGGTCG
TTTGCTTTGG AATCGGCAAT GGATGAACTG GCCTACGCCC TGAACATGGA CCCGATGGCC
TTACGATTAA AGAACTACGC CGAAGTAGAC CCCGAGAACA ACAAGCCCTG GTCGAGTAAA
TACCTGAAAG ACTGCTACGA ACGGGGCGCC GACCGGTTTG GGTGGAGCAA GCGTAACCCG
CAACCTGGCT CCATGCGGTC GGGCGAAGTG CTGGTTGGTT TCGGGATGAG TTCGGGAATT
TACAAAGCCG AACGTAGTCC GGCGGCTGCT GTGGCTAAAT TAACGGCAGA CGGCAAACTA
CTAATTCAAA GTGCCACCGC CGATACCGGT CCGGGAACCT ATACGGTAAT GACTCAGATT
GCGGCCGATC TCACCGGTAT TGCGCCGGAG CGGATTACGT TCGAACTGGG CGACTCGTCG
TTTCCGCAGG CACCGCCCCA GTTTGGCTCG CATACGGTGT CGTCGGTAGG GTCGGCGGTG
CACGACGTGT GCATGGCTCT CCGGCAGCGG TTAGGCGAGC TGGCCATCTA CAAAGAAGGG
TCTCCCTTAT ATGGGGCCAA AGAATCCGAC CTTATTTTCG ATGGCGATAC CATCCGGTCG
AAACGGGTAA CGGCCCGTTT ATCATTCAGC GAGATACTCA GGCTGAACAA CCTGCCGGAA
CTGGTCATTA CGAAAGAAGC GAAGAGTGGA CCGGAAGTCG GGAAGTATTC GGGTAAATCG
TTCTGCGCCA ACTTTGTGGA GGTGCATGTG CATCCGCAAA CGGGCGTGGT AAAAGTAGCA
CGGGTAGTGT CGGCCATTGA TTCGGGCAAG ATCATGAACC ACAAAACCGC CCGTAGTCAG
GTACTGGGCT CGGTTGTGTG GAGCCTGGGA ATGTCTCTGA TGGAAGATGG CATCATCGAC
CACCGATTTG GCCGGTATGT AAACAAGGAT CTGGCCGAAT ACCACGTCCC CGTTTGCGCC
GACATGCCCG AAGTAGAGGT CATTATGATT GACAAACCGG ACCCAATTCT GGACCCTATG
GGCGCTAAAG GGCTGGGTGA AATTGGCATG ATTGGTTTGC CGGCAGCCAT TGCCAATGCC
GTTTATCACG CTACCGGCAA GCGCATCCGG GAACTGCCCA TTACTGCCGA TAAACTTTTG
TGA
 
Protein sequence
MEKFAVNSVS MGDPMSRVDG RLKVTGSAKY AAEYNLPGVT FGVLVTSTIA KGRIVGMNTK 
TAEKVAGVLG VLTHKNAPKV PGYEAGTDNA SSRVYGQEFR VFYDDRIYFN NQPVALVIAD
TLERATYAAS LVTVAYQPEP HQTDTKVNLD KAIKPERSED YSRGISNAYK TAPVTVEQTY
HTPVHVHNPI EPHAATAVWE SEDKLIVYNK SQGVKLAQKD LMKAFNLKEE NIQVYSPFVG
GAFGSSSRIW PQEMAAILGA KLVGHPVKVA LKREQQFNMV GYRPRSIQKM GLGATADGTL
VGITHEAYGL TSTYEQFTER ILHPTKSSYR CPNLTAVYRL VPLDVSTPCW TRGPGETSGS
FALESAMDEL AYALNMDPMA LRLKNYAEVD PENNKPWSSK YLKDCYERGA DRFGWSKRNP
QPGSMRSGEV LVGFGMSSGI YKAERSPAAA VAKLTADGKL LIQSATADTG PGTYTVMTQI
AADLTGIAPE RITFELGDSS FPQAPPQFGS HTVSSVGSAV HDVCMALRQR LGELAIYKEG
SPLYGAKESD LIFDGDTIRS KRVTARLSFS EILRLNNLPE LVITKEAKSG PEVGKYSGKS
FCANFVEVHV HPQTGVVKVA RVVSAIDSGK IMNHKTARSQ VLGSVVWSLG MSLMEDGIID
HRFGRYVNKD LAEYHVPVCA DMPEVEVIMI DKPDPILDPM GAKGLGEIGM IGLPAAIANA
VYHATGKRIR ELPITADKLL