| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4017 |
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| Symbol | |
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| ID | 8727775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4827230 |
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| End bp | 4828150 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003388806 |
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| Protein GI | 284038876 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.176614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00151279 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGGCA GTCAAACAAG ACGGGTAAAA TCCATCAGCG AGTTTCATTC TTTTAAAGGC
TTGCCACAGC CCGAACACCC GTTAATTAGC GTGATCGACT ATGGTGCCAT TGCTTGTATT
CCGGAAAATC ATGCCAGCAA TTATGTTTTT GATTTCTACA ACATTGCGGT GAAACGGGGC
GTCGGTGCTA AGCTCAAATA CGGCCAGCAG GCCTATGATT TCGACAATGG CGTTATGTTC
TTTGTTTCGC CTGACCAGGT TTTTGGTATC GAACCAAACC CCGATGCCAA TGTTAAACGC
AGCGGCTGGA TGCTATTGAT TCACCCCGAC TTTTTCTGGA ACACATCGTT GGCCCAGACG
ATTAAGCAGC ATGAGTTTTT CGACTATTCA GTAAACGAGG CTTTGTTTCT GTCGGACAAG
GAAGAAGCGA CCATCAACGG AATCCTGCAA AACATTCGGC AGGAGTGCAG TGCCAACATC
GACAAGTTCA GTCAGGGAAT CATCGTTTCG CATATCGAAG CGTTACTGAA TTATTCGGAG
CGTTTTTATC ATCGCCAGTT CATTACCCGC AACATGGCGA ACCATAAGAT TTTGGATCGG
CTGGAGAAAT TGCTCACCAG CTATTTCAAT AGCGATGACC TGGTTATAAA GGGCCTGCCG
ACCGTTACCT ATGTGGCCGA TGCGCTGAAC ATCTCGCCCA AATACCTGAG CAGTTTGTTG
AAAAACCTGA CCGGGCAGAA TACCCAGCAG CATATCCACA ACAAGCTGAT TGAAAAAGCC
AAGGAACGAT TGTCAACCAC GCCTTTATCC GTCAGCGAAA TTGCGTATAC ACTCGGCTTT
GAGCATTCTC AATCTTTCAG CAAACTGTTC AAATCGAAGA CCAACTTATC GCCTTTAGAA
TTTAGAGGCT CGTTTGCCTG A
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| Protein sequence | MAGSQTRRVK SISEFHSFKG LPQPEHPLIS VIDYGAIACI PENHASNYVF DFYNIAVKRG
VGAKLKYGQQ AYDFDNGVMF FVSPDQVFGI EPNPDANVKR SGWMLLIHPD FFWNTSLAQT
IKQHEFFDYS VNEALFLSDK EEATINGILQ NIRQECSANI DKFSQGIIVS HIEALLNYSE
RFYHRQFITR NMANHKILDR LEKLLTSYFN SDDLVIKGLP TVTYVADALN ISPKYLSSLL
KNLTGQNTQQ HIHNKLIEKA KERLSTTPLS VSEIAYTLGF EHSQSFSKLF KSKTNLSPLE
FRGSFA
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