| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3993 |
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| Symbol | |
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| ID | 8727751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4801958 |
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| End bp | 4805203 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003388782 |
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| Protein GI | 284038852 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.356607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00078443 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGAAC GATTATTTGC ACTTCTCTTC TTACTTCCTT TGCTTTCTTT TGCCCAGCAG
CGCGTTGTGC GTGGTAAGGT AAGCGATGCT AATGGGAAAG AATCTCTACC CGGTACCACG
GTAACGGTGA AAGGTGGTAC AGCGGGTACA GTAACCGACG CACAGGGAAC TTATCAGATA
AATGTACCCG ATAAAGCAGC AACGCTGGTT TTCTCGTCTG TCGGCTTTCG ACTACAAGAG
ATAGTTGTTG GTAATCAGCA GGTTATCGAT GTGTCGCTCA TTGCCGATAC CAAGCAGCTC
AGTGAAGTGG TGGTTACCGC AGCGGGTATC AAACGGGATA AAAATGCGCT CGGTTATTCG
GTATCAACGC TGGATGCCAA CAAGCTGGCT CAGCGGTCAG AACCGGATCC ACTCCGGGCA
CTTACCGGTA AAGTCGCGGG TGTTAATGTG CAGGGTTCAG GGGGGGCGGC CGGTGGTGCA
ACGAATATTA CTATTCGGGG AAATTCGTCG CTGGGCAATA ACAACCAGCC ACTGTTTGTG
GTCGATGGGG TTCCCTTTGA TAATTCCAGT TTCGGCAGTA CGGACGGATT TGTTGGCGGG
TCGACCGTTA CCAACCGGGC TTTTGACCTG GACCCGAACA ATATTCTTAC CATGACGGTG
CTGAAAGGAG CCGCTGCGGC TGCCCTTTAC GGCTCCAGAG CGGCTAACGG AGCCATCATC
GTGACCACAA AAGCCGGTAA AAGCACCAGC CGGAAAGGGC TTGAAATCAC GTATAGTTCC
GGCTACTCGA CAGAAACGGT GGCCGGTTTG CCGGATTACC AAACCAAGTA TGGACAGGGA
ACGAACTTCG ATTATCGGAG TGGTGTATTC GGCTCGTGGG GACCGCCGTA CGCAGGCTAT
ACCAGCCTGA TTCCCACCCG GGCTACCATT CCGCACCCGC TCACGACGAA TAACCGCTAT
CCATCAACGG TATTTCCGCA GTTTTATCAG GCCGATGGCA CAACGCCCAT TCAGGTACCT
TACCAGTCGT ATTCGCAGGG CAACGCCAAA AATTTCTTTC GGACAGGAAA CGTCTTTGAA
AACGCCCTCT CGGTATCGAC AGGTGGCTCG AAGGGGAATT TTACGGTGGG TCTTTCCCGC
ACGGGTAATC AGGGTGTAGT GCCCGAGAAC CAGATCACCC GTACCGGTAT CAACATTGGT
GGTAACGCCC AGCTGGATAA TAAGTTCTAC GTGAGCGGTG CCCTGAACTA CGTCAATACC
GAGCAGGTAT CTCCGCAGGT GACGGCGGCC AATGGCAGCG GCAGTTCCAT TATGGACATC
CTGATGTTTG TGCCTACCAG CTTCGACCTG ACGGGTTACC CGAACACCAA TCCGCTGAAC
GGCAATAATG TATACGACCG CGTCGGTACC GATAACCCTT ACTGGTCGGT CAAAAACAGT
CCGACAATCA GTAAGGTTGA TCGCTATTAC GGTAATGTCG TGCTGGGGGT CGATCCGTTG
CCCTGGCTGA ACGTGCAGAA TACCGTCGGC TTCAATGCGT ATACCGACCG GCGTGTGGTC
GTCAATGGAA AAGGCGGGGA CTACTTCCCG AACGGCAACA TCACGAACGA TAATATCTAT
CGGCAGGAAC TGGACAACAC CCTGCTCGTA ACGGCAACTA AACCGCTTTC GGAAAACATT
GGCCTGAAAG TAATTCTGGG AAACAACGTT AACCAGCGCG TAACGGAGCG GCAGGTTGTG
TTTGGCGACG GGATCATTTT TCGGGGTATC AACTCGCTGA ACAACACCAG CGTGACCATT
CCCCGCGTGT TGCCCAATAA CCGCAATAAT TTCAAACAGC GATACTTTGC ATTCTTCACC
GATATTTCGC TGGACTACAA AAACTACGCG TTTTTAAACC TCGTAGCCCG TAACGACGTA
TCGTCTACAC TGCCCGCCAG CAACCGAAGC TACCTGTATG GCGGGGCCAG TGCCTCCCTG
ATCTTTACCG AAGCGTTGAA ACTGCCTAAA AACGTTCTTT CGTTTGGTAA GCTTCGGGCT
GGCTACACCC GCGTAGGTAA CGAAGCAACG CCTTACCAGA CGCAAACGGT GTACATCGCC
AACCCTGTTC TGGGCGTTGG GTCGGGCACG GGATCTATCT CATCGCCGTT CAGCGGCCAA
AGTACGCTGT CCGAATCAGA CTTGCTGGCC AATTCAGAGT TGAAGCCCGA GTTCATTACC
GAGCTTGAGG TGGGTACGGA GTTACAGTTT TTCAATAACC GGATAGGCCT GGACATCACG
TACTATAACA AGATCAGTAC GTCGCAGATT TTTACGGTCA ACGCCACACC CTCGTCGGGG
TACACGCAGC GGGTAATTAA TCTGGGGCGT TCGTCTAACG AAGGCATCGA GATTGGTCTG
ACGGCAACGC CCGTAAAACT CAAGAACGGG TTTAGCTGGG ATATCTCATC GGCCTTCACC
ATGAACCGCA ACATTGTACT GGACATAGGT TCCCTGAAAG AACTGCCCTA CGGTGGTTTC
TCGGACCTAG GTAGTGTACA CATTGCCGGT CAGCCCTACG GACAGATTCG CGGGTCGACG
TATGCCAGAG ATGAGGTGGG CAATATCCTG GTCAATCCCA ACACGGGAAA GCCGATCCTG
AGCGGTAAAA CGGCCGCTAT CGGTAATCCA AACCCCGATT TTATTCTGGG CGTAACCAAT
ACCTTTAGTT ATAAAGGGCT TACGCTGAGC GCGTTGTTCG ACTGGAAGAA AGGGGGCGAC
ATGTACTCCT TTACGGCTTA CGAACTGCTA AGCCGGGGTG CAACCAAAGA CACCGAAGAG
CGGGAGGCCA TTCTGGTGGG ACCGGGTGTG CTGGGCGATG TGAACACGCT GAAACCCCTG
CTGGATGGCG AAGGCAAAAA GATTCCGAAC AACATTGGTA TTGCCGTAGC TGATTACTAT
TTCACGGGCG GCTTTGGACC GGGTGGCGCG GGCGAAACGA ATATTTTCGA CGCCACCATT
TTCCGGCTTC GTGAAGTATC GCTGGGCTAC CAGTTTCCGA AAAAATGGCT GGCGAAAACA
CCCTTTGGCG GGGCGTTCCT ATCCGTCAGT GGGCGCAACC TATGGTACCT GGCTCCCAAC
TTTCCCAAGT ACCTGAATTT TGATCCCGAG GTTAGCTCAT TAGGTGCCGG TAATTCACAG
GGCTTCGATT TCATCGGTAT ACCGACAACC CGCCGACTGG GTGTCAACCT GCGGTTCAGC
TTCTGA
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| Protein sequence | MKERLFALLF LLPLLSFAQQ RVVRGKVSDA NGKESLPGTT VTVKGGTAGT VTDAQGTYQI
NVPDKAATLV FSSVGFRLQE IVVGNQQVID VSLIADTKQL SEVVVTAAGI KRDKNALGYS
VSTLDANKLA QRSEPDPLRA LTGKVAGVNV QGSGGAAGGA TNITIRGNSS LGNNNQPLFV
VDGVPFDNSS FGSTDGFVGG STVTNRAFDL DPNNILTMTV LKGAAAAALY GSRAANGAII
VTTKAGKSTS RKGLEITYSS GYSTETVAGL PDYQTKYGQG TNFDYRSGVF GSWGPPYAGY
TSLIPTRATI PHPLTTNNRY PSTVFPQFYQ ADGTTPIQVP YQSYSQGNAK NFFRTGNVFE
NALSVSTGGS KGNFTVGLSR TGNQGVVPEN QITRTGINIG GNAQLDNKFY VSGALNYVNT
EQVSPQVTAA NGSGSSIMDI LMFVPTSFDL TGYPNTNPLN GNNVYDRVGT DNPYWSVKNS
PTISKVDRYY GNVVLGVDPL PWLNVQNTVG FNAYTDRRVV VNGKGGDYFP NGNITNDNIY
RQELDNTLLV TATKPLSENI GLKVILGNNV NQRVTERQVV FGDGIIFRGI NSLNNTSVTI
PRVLPNNRNN FKQRYFAFFT DISLDYKNYA FLNLVARNDV SSTLPASNRS YLYGGASASL
IFTEALKLPK NVLSFGKLRA GYTRVGNEAT PYQTQTVYIA NPVLGVGSGT GSISSPFSGQ
STLSESDLLA NSELKPEFIT ELEVGTELQF FNNRIGLDIT YYNKISTSQI FTVNATPSSG
YTQRVINLGR SSNEGIEIGL TATPVKLKNG FSWDISSAFT MNRNIVLDIG SLKELPYGGF
SDLGSVHIAG QPYGQIRGST YARDEVGNIL VNPNTGKPIL SGKTAAIGNP NPDFILGVTN
TFSYKGLTLS ALFDWKKGGD MYSFTAYELL SRGATKDTEE REAILVGPGV LGDVNTLKPL
LDGEGKKIPN NIGIAVADYY FTGGFGPGGA GETNIFDATI FRLREVSLGY QFPKKWLAKT
PFGGAFLSVS GRNLWYLAPN FPKYLNFDPE VSSLGAGNSQ GFDFIGIPTT RRLGVNLRFS
F
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