| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3970 |
|---|
| Symbol | |
|---|
| ID | 8727728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4767151 |
|---|
| End bp | 4768431 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | UDP-glucuronosyl/UDP-glucosyltransferase |
|---|
| Protein accession | YP_003388759 |
|---|
| Protein GI | 284038829 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00770108 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCC ACCTGAATCC ACTGACCGGA CTGGCTGTTC ACCTTCAACA ACTTGGCCAC
GATGTGCGCT GGTATACCGG TCCAACCTAC GCCGACAAAA TCAAATCGCT GGGTATCCCG
TACTATCCTT ATCAGCAGGC GAAGGAAATC AACCAGCTCA ACATGGATAC GGCGCTGCCC
GAACGCCAGC ATATCAAAGG AACCATAGCC CGGCTGCGGT TCGACCTCAA CAACCTTTTT
CTACTTCGGG CACCGGAGTT CGTGATTGAT TTGAAGGCCA TTTACAATGA GTTTCCGTAC
GATCTGCTCG TATGCGATAT GATCTTCACT GGAGCACCTT TCATCCAGAA ACTGCTGAAT
GTGCCGGTGG CTGCGGTGGG TGTGGTGCCT TTGTCCGAGA CAGGGCGGGA CGTACCACCG
GGTGGTCTGG GCATGGTGCC CGCCAACGGA TTGTTCGGGA AACTGAAGCA GGATTTTATT
CGCTACCTGA CCGTCAATCA CCTGCTCAAA CCCTGCACCG ATCTGTTCAA TCACCTGCTG
GAAGAACATG GTCTGCCCAC GACGACCGAT TTTATGTTCG ATACTTTCAT CCGGCAACCC
GATCTTTTTT TGCAGAGCGG TACGCCCGCT TTCGAATATC CGCGTCAGAC GATGAGCCCG
AACATTCGGT TCGTTGGCCC AATGTTGCCT CATAACAAAG GGGGGCGGCA TCCGTTCCGG
CAGGTGGAGT TGGCGAAGCA GTACAAAAAG GTGGTACTGG TAACGCAGGG AACCGTTGAG
CGCGATCCCG CCAAGATCAT CGTTCCTACG CTTGAGGCTT TTAAAGATGA TCCTAAAACG
CTGGTAGTTG TCACAACGGG GGGCTCACAG ACCGCCGAGC TGCGAGCGCG TTACCCGCAA
ACGAATTTTA TCATTGAAGA CTTTATTGAT TTCAATTCGG TCATGCCGCA TGTGCATGTA
TACGTGACCA ATGCGGGTTA TGGTGGGGTA ATGCTGGCCT TACAGCATGG ATTGCCGATG
GTGGCCGCCG GGGTGTATGA AGGCAAAAAC GACATTGCTG CCCGCATCGG GTACTTTAAA
GTGGGCGTAA ACCTGAAAAC GGAAACGCCA ACAGCCGCCC AGATTCGAAA AAGCGTGGCC
CAGGTGCTGG CCGACCGCAA TTACAAACGA AACGTGCAGC GTATAGGTGT CGACTTCATG
CAGTACGACG CAAACACGGT CTGCACAACG TACATCAACG AACTGCTGGG AAAGTTCGAA
CCTGAAGCGG AACTCGTGTA G
|
|---|
| Protein sequence | MDGHLNPLTG LAVHLQQLGH DVRWYTGPTY ADKIKSLGIP YYPYQQAKEI NQLNMDTALP
ERQHIKGTIA RLRFDLNNLF LLRAPEFVID LKAIYNEFPY DLLVCDMIFT GAPFIQKLLN
VPVAAVGVVP LSETGRDVPP GGLGMVPANG LFGKLKQDFI RYLTVNHLLK PCTDLFNHLL
EEHGLPTTTD FMFDTFIRQP DLFLQSGTPA FEYPRQTMSP NIRFVGPMLP HNKGGRHPFR
QVELAKQYKK VVLVTQGTVE RDPAKIIVPT LEAFKDDPKT LVVVTTGGSQ TAELRARYPQ
TNFIIEDFID FNSVMPHVHV YVTNAGYGGV MLALQHGLPM VAAGVYEGKN DIAARIGYFK
VGVNLKTETP TAAQIRKSVA QVLADRNYKR NVQRIGVDFM QYDANTVCTT YINELLGKFE
PEAELV
|
|---|
| |