| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3956 |
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| Symbol | |
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| ID | 8727714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4747230 |
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| End bp | 4748579 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003388745 |
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| Protein GI | 284038815 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.621866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.612872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGC CAGCTTCTAT ACCGCGCCAA CCTAACACTT TAACCCCTAC CCCTGTGACT
ACTTCCAAAA CCCATAATTA CCGGTGGATT ATCGTCGTCC TGTTATTCAC CGCAACCACA
ATCAACTACC TCGACCGGCA GATCATCGGT CTGCTGAAAC CCATTCTGGA AGTTGAATTT
TCCTGGACCG AAACACAGTT TGCCAACATC GTGATCGCCT TCACGGCAGC CTATGCCGTT
GGTCTTTTAG TGTTCGGCTG GTTTATCGAT AAGGTTGGCA CAAAAATAGG ATACGCCGTC
ACAATCGTCT GGTGGAGCGT GGCCGGTATG CTGCACGCGC TGGCCCGCAG TGCGTTTGGT
TTTGGTTTGG CCCGCGTAGG GTTAGGGCTG GGCGAAGCAG GGAATTATCC AGCCGCCGTG
AAGACCGTTG CCGAGTGGTT TCCCCAGAAA GAGCGTGCCC TGGCAACGGG TCTATTTAAC
GCCGGTACAA GCATTGGCGT GGTGGCGGCC CTGCTCATTG TACCCTGGAT TTTGAGCCAT
TACGGCTGGC AGGAAGTGTT CTGGATTACG GGTGCTATGG GCTTTGTCTG GCTCATTTTC
TGGCTCATTT TCTATGAAGT TCCAGCGCGG CAGCAACGGC TGTCGGCTGA GGAGTATGAT
TACATTACCA GTGGTCAGGA AGCAGAAACC GAAAAGAAGC TGCCTATCAA GTGGTTCAGG
TTGTTTACCC TTCCGCAGAC CTGGGCGCTC ATCACCGGCA AAGGACTTAT CGACCCCATT
TACTGGTTTT TCCTGTTCTG GCTCCCTTCC TATTTCTCGT CGACATTTAA GCTGGACCTT
AAGAAACCCA GTCTGGAGCT GATGCTCATT TATCTGGCCA CCACCGTGGG CAGCATTGGT
GGCGGGTATT TATCGTCATG GCTCATCAAA CGCGGCTGGC CGACGCTGAA AGCCCGAAAA
ACCGTTTTGA TCATATTTGC CGGGTTGGAA TTATCCATTA TCCTTGCTCA ATTTGCGACG
GATGTCTGGG TAGCGGTGGG GCTGATCAGT CTGGCGGTGG CCGTTCACCA GGCCTGGGCG
ACCAACGTGT TTACGATGGC GTCTGATTTA TTCCCTAAAC AAGCGGTCAG TTCGGCCGTT
GGTATAGCGG GGATGGCCGG AGCCGTGGGC GGAATTTTCT TCCCGATGCT AGTCGGTCGT
TTGCTGGACA CCTACAAAGC GGCTGGCAAT CTGTCGGGGG GTTACAACGT ATTATTCACC
ATCTGCGGAT TTACGTACCT GACAGCCTGG GTTATCATCC ACCTGCTTAC CCGAAAGCCT
AAACCAGTCG ATATAAGCCA ACTGACGTAA
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| Protein sequence | MPAPASIPRQ PNTLTPTPVT TSKTHNYRWI IVVLLFTATT INYLDRQIIG LLKPILEVEF
SWTETQFANI VIAFTAAYAV GLLVFGWFID KVGTKIGYAV TIVWWSVAGM LHALARSAFG
FGLARVGLGL GEAGNYPAAV KTVAEWFPQK ERALATGLFN AGTSIGVVAA LLIVPWILSH
YGWQEVFWIT GAMGFVWLIF WLIFYEVPAR QQRLSAEEYD YITSGQEAET EKKLPIKWFR
LFTLPQTWAL ITGKGLIDPI YWFFLFWLPS YFSSTFKLDL KKPSLELMLI YLATTVGSIG
GGYLSSWLIK RGWPTLKARK TVLIIFAGLE LSIILAQFAT DVWVAVGLIS LAVAVHQAWA
TNVFTMASDL FPKQAVSSAV GIAGMAGAVG GIFFPMLVGR LLDTYKAAGN LSGGYNVLFT
ICGFTYLTAW VIIHLLTRKP KPVDISQLT
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