| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3953 |
|---|
| Symbol | |
|---|
| ID | 8727711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4743108 |
|---|
| End bp | 4745351 |
|---|
| Gene Length | 2244 bp |
|---|
| Protein Length | 747 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | Quinoprotein glucose dehydrogenase |
|---|
| Protein accession | YP_003388742 |
|---|
| Protein GI | 284038812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAT ACCTGAAACC CTTACTCGGT CTGCTCATTC TGGGAAGTTT TGTATCCCTG
AAAGACGACC CAAAATCAAT AAACCAGTCG CCCCCCAACG ACGACTGGCC GACCTATGGC
GGCAATAACG CGGGTAACCG GTACTCGAAA CTAACGCAGA TCAATACCGG AAACGTCAAG
AACCTGAAGC TGGCGTGGAG CTACGACACG GGCGACAATA AAGACGTGTC GCAGCGGGGC
ATGGATATTC AGTGCCAGCC CATCGTGGTC AACGGTGTGC TCTACGGCAC ATCGCCCCGG
CTGAAACTCT TTGCCGTGGA TGCGGCCACG GGCAAGCAGC GCTGGCAGTT CGACCCCTTT
GCCGACCCCG ACACCAAGCC CCGGTTCCAC CCGATGCGCG GGGTGATGTA TTGGGAAGAT
GGCAATGACA AACGGGTACT CTACACCGTG GGCTCCTTTC TGTACGCCAT CAACGCAGAC
ACCGGCAAGC CCGTTGAGAG CTTCGGAAAG CAGGGGAAGG TGGATCTGCA CGAGGGTCTG
GGCGATAAAG AAACCATCGG TCACGACGTG GAGAACCTGT CCATCCGTGT TACAACACCG
GGCGTTATTT ACAAAGATTT GCTCATCACC GGCTCGGCGG TGAACGAAGG GGGCGATGCG
CCACCGGGCT ACATCCGGGC GTTTAATGTG CGGACGGGTA AACTTGTCTG GGTGTTCCAT
ACCATCCCGT TGCCGGGTGA GTACGGTTAC GAAACCTGGG GCAAAGATTC GTACAAAAAG
CTGGGCGGGG CCAACTGCTG GGCGGGTATG GTGCTCGACG AAAAACGCGG AGTCGTATAC
GCCGGTACCG GCTCGCCCTC CGTCGATTTC TACGGCGGTG CCCGCCCCGG TCAGAATCTA
TTTGCCAACT GTGTCATTGC CCTGAATGCC ACCACCGGCA AGCGAATCTG GCATTTTCAG
ACCGTACACC ACGATTTATG GGACCGTGAC CTACCCTGCC CGCCCAACCT CATTACGGTG
AAGCACAACG GACCCGACGG TAGGCCCCGG CTAGTCGACG CCGTAGCGCA GGCCACCAAA
GACGGCTATG TGTTCGTTTT TGACCGGGAT ACGGGCAAGC CACTTTTCCC AATAAAAGAA
GTATCGGTGA TGACATCGCC CGCTTTACCC GGCGAAAAGC CCTGGCCAAC CCAGCCCGTT
CCGACCAAAC CGGCTCCGTT TGTCCGGCAG GAACTGACCG AAAACGAAAT CACGACCCGG
ACGCCCGAAG CCCACGCCTA CGTACTGGAC CGCTACCGCA ACAGCCGACA CGGCAGCAAA
TACATGCCGC CCAGCATCGA AGGCACGCTC TATTACGGCT TTGGGGGCGG GGCCGAATGG
GGAGGCAATG CCGCCGATCC AGACGGAATT CTCTACCAGA ACGCCAACAC CATGCTTTGG
TGGCTCAAAA TGCGCGACGT TCGGGCGCAG GCCGATGGTG TAGCCCTGAC GCGGGGCGCT
AGCCTGTTCA ATATCAACTG TGCCGTTTGC CATGCTGCGG GGGAGAAATC GGGGGGAGCG
AGCCAGACGG CCCAAGCCTA CCCGAACCTG ACAGACGTTG GTAAACGATT GACGAAAGAA
CAGATCGCAT CCATTCTGAC CACGGGTCGG GGACGGATGC CGTCGTTCGG GCACCTGTCT
GCCGACGACC GGGAGGCCAT TATCCGGTTC CTGCTGAAAC AGGACACCAA ACCGGTAGCA
ACGGCCTCTG CGGCCAACGA CCTGCACAGT TCTGTAGTGA ACACGCCGAC GGTTGAGGGG
GCCGATTTTC CGTACATGCC CCCTTATCTC AACAACGGCA ACACGCAGTT TCGCGATCAG
GATAATTACC CGGCTATTAA ACCGCCCTGG GGCACGCTCA ACGCTATTAA CCTGAACACC
GGCGAATACC TCTGGCAGGT TCCCCTGGGC GAATACCCGG AACTATCGAA AAAAGGGATA
CCCCCCACCG GCACCGAAAA CCACGGCGGA CCTATCGTAA CGGCGGGCGG TCTGGTCTTT
ATTGCGGCCA CATATGACGA AAAGCTTCGG GCATTTGACA AGAAAACCGG TAAAATCGTG
TGGGAGTACA AGCTGCCCGC CGGTGGTTTT GCCACGCCTA TCACGTACAT GGTTAACGGA
AAGCAATATA TTGTCATTGC TGCGGGCGGA ACCCGTTACG GACTCAAGCC CGGTGGCTCA
TATGTAGCGT TTGCATTGCC GTAA
|
|---|
| Protein sequence | MNTYLKPLLG LLILGSFVSL KDDPKSINQS PPNDDWPTYG GNNAGNRYSK LTQINTGNVK
NLKLAWSYDT GDNKDVSQRG MDIQCQPIVV NGVLYGTSPR LKLFAVDAAT GKQRWQFDPF
ADPDTKPRFH PMRGVMYWED GNDKRVLYTV GSFLYAINAD TGKPVESFGK QGKVDLHEGL
GDKETIGHDV ENLSIRVTTP GVIYKDLLIT GSAVNEGGDA PPGYIRAFNV RTGKLVWVFH
TIPLPGEYGY ETWGKDSYKK LGGANCWAGM VLDEKRGVVY AGTGSPSVDF YGGARPGQNL
FANCVIALNA TTGKRIWHFQ TVHHDLWDRD LPCPPNLITV KHNGPDGRPR LVDAVAQATK
DGYVFVFDRD TGKPLFPIKE VSVMTSPALP GEKPWPTQPV PTKPAPFVRQ ELTENEITTR
TPEAHAYVLD RYRNSRHGSK YMPPSIEGTL YYGFGGGAEW GGNAADPDGI LYQNANTMLW
WLKMRDVRAQ ADGVALTRGA SLFNINCAVC HAAGEKSGGA SQTAQAYPNL TDVGKRLTKE
QIASILTTGR GRMPSFGHLS ADDREAIIRF LLKQDTKPVA TASAANDLHS SVVNTPTVEG
ADFPYMPPYL NNGNTQFRDQ DNYPAIKPPW GTLNAINLNT GEYLWQVPLG EYPELSKKGI
PPTGTENHGG PIVTAGGLVF IAATYDEKLR AFDKKTGKIV WEYKLPAGGF ATPITYMVNG
KQYIVIAAGG TRYGLKPGGS YVAFALP
|
|---|
| |