Gene Slin_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3953 
Symbol 
ID8727711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4743108 
End bp4745351 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content58% 
IMG OID 
ProductQuinoprotein glucose dehydrogenase 
Protein accessionYP_003388742 
Protein GI284038812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAT ACCTGAAACC CTTACTCGGT CTGCTCATTC TGGGAAGTTT TGTATCCCTG 
AAAGACGACC CAAAATCAAT AAACCAGTCG CCCCCCAACG ACGACTGGCC GACCTATGGC
GGCAATAACG CGGGTAACCG GTACTCGAAA CTAACGCAGA TCAATACCGG AAACGTCAAG
AACCTGAAGC TGGCGTGGAG CTACGACACG GGCGACAATA AAGACGTGTC GCAGCGGGGC
ATGGATATTC AGTGCCAGCC CATCGTGGTC AACGGTGTGC TCTACGGCAC ATCGCCCCGG
CTGAAACTCT TTGCCGTGGA TGCGGCCACG GGCAAGCAGC GCTGGCAGTT CGACCCCTTT
GCCGACCCCG ACACCAAGCC CCGGTTCCAC CCGATGCGCG GGGTGATGTA TTGGGAAGAT
GGCAATGACA AACGGGTACT CTACACCGTG GGCTCCTTTC TGTACGCCAT CAACGCAGAC
ACCGGCAAGC CCGTTGAGAG CTTCGGAAAG CAGGGGAAGG TGGATCTGCA CGAGGGTCTG
GGCGATAAAG AAACCATCGG TCACGACGTG GAGAACCTGT CCATCCGTGT TACAACACCG
GGCGTTATTT ACAAAGATTT GCTCATCACC GGCTCGGCGG TGAACGAAGG GGGCGATGCG
CCACCGGGCT ACATCCGGGC GTTTAATGTG CGGACGGGTA AACTTGTCTG GGTGTTCCAT
ACCATCCCGT TGCCGGGTGA GTACGGTTAC GAAACCTGGG GCAAAGATTC GTACAAAAAG
CTGGGCGGGG CCAACTGCTG GGCGGGTATG GTGCTCGACG AAAAACGCGG AGTCGTATAC
GCCGGTACCG GCTCGCCCTC CGTCGATTTC TACGGCGGTG CCCGCCCCGG TCAGAATCTA
TTTGCCAACT GTGTCATTGC CCTGAATGCC ACCACCGGCA AGCGAATCTG GCATTTTCAG
ACCGTACACC ACGATTTATG GGACCGTGAC CTACCCTGCC CGCCCAACCT CATTACGGTG
AAGCACAACG GACCCGACGG TAGGCCCCGG CTAGTCGACG CCGTAGCGCA GGCCACCAAA
GACGGCTATG TGTTCGTTTT TGACCGGGAT ACGGGCAAGC CACTTTTCCC AATAAAAGAA
GTATCGGTGA TGACATCGCC CGCTTTACCC GGCGAAAAGC CCTGGCCAAC CCAGCCCGTT
CCGACCAAAC CGGCTCCGTT TGTCCGGCAG GAACTGACCG AAAACGAAAT CACGACCCGG
ACGCCCGAAG CCCACGCCTA CGTACTGGAC CGCTACCGCA ACAGCCGACA CGGCAGCAAA
TACATGCCGC CCAGCATCGA AGGCACGCTC TATTACGGCT TTGGGGGCGG GGCCGAATGG
GGAGGCAATG CCGCCGATCC AGACGGAATT CTCTACCAGA ACGCCAACAC CATGCTTTGG
TGGCTCAAAA TGCGCGACGT TCGGGCGCAG GCCGATGGTG TAGCCCTGAC GCGGGGCGCT
AGCCTGTTCA ATATCAACTG TGCCGTTTGC CATGCTGCGG GGGAGAAATC GGGGGGAGCG
AGCCAGACGG CCCAAGCCTA CCCGAACCTG ACAGACGTTG GTAAACGATT GACGAAAGAA
CAGATCGCAT CCATTCTGAC CACGGGTCGG GGACGGATGC CGTCGTTCGG GCACCTGTCT
GCCGACGACC GGGAGGCCAT TATCCGGTTC CTGCTGAAAC AGGACACCAA ACCGGTAGCA
ACGGCCTCTG CGGCCAACGA CCTGCACAGT TCTGTAGTGA ACACGCCGAC GGTTGAGGGG
GCCGATTTTC CGTACATGCC CCCTTATCTC AACAACGGCA ACACGCAGTT TCGCGATCAG
GATAATTACC CGGCTATTAA ACCGCCCTGG GGCACGCTCA ACGCTATTAA CCTGAACACC
GGCGAATACC TCTGGCAGGT TCCCCTGGGC GAATACCCGG AACTATCGAA AAAAGGGATA
CCCCCCACCG GCACCGAAAA CCACGGCGGA CCTATCGTAA CGGCGGGCGG TCTGGTCTTT
ATTGCGGCCA CATATGACGA AAAGCTTCGG GCATTTGACA AGAAAACCGG TAAAATCGTG
TGGGAGTACA AGCTGCCCGC CGGTGGTTTT GCCACGCCTA TCACGTACAT GGTTAACGGA
AAGCAATATA TTGTCATTGC TGCGGGCGGA ACCCGTTACG GACTCAAGCC CGGTGGCTCA
TATGTAGCGT TTGCATTGCC GTAA
 
Protein sequence
MNTYLKPLLG LLILGSFVSL KDDPKSINQS PPNDDWPTYG GNNAGNRYSK LTQINTGNVK 
NLKLAWSYDT GDNKDVSQRG MDIQCQPIVV NGVLYGTSPR LKLFAVDAAT GKQRWQFDPF
ADPDTKPRFH PMRGVMYWED GNDKRVLYTV GSFLYAINAD TGKPVESFGK QGKVDLHEGL
GDKETIGHDV ENLSIRVTTP GVIYKDLLIT GSAVNEGGDA PPGYIRAFNV RTGKLVWVFH
TIPLPGEYGY ETWGKDSYKK LGGANCWAGM VLDEKRGVVY AGTGSPSVDF YGGARPGQNL
FANCVIALNA TTGKRIWHFQ TVHHDLWDRD LPCPPNLITV KHNGPDGRPR LVDAVAQATK
DGYVFVFDRD TGKPLFPIKE VSVMTSPALP GEKPWPTQPV PTKPAPFVRQ ELTENEITTR
TPEAHAYVLD RYRNSRHGSK YMPPSIEGTL YYGFGGGAEW GGNAADPDGI LYQNANTMLW
WLKMRDVRAQ ADGVALTRGA SLFNINCAVC HAAGEKSGGA SQTAQAYPNL TDVGKRLTKE
QIASILTTGR GRMPSFGHLS ADDREAIIRF LLKQDTKPVA TASAANDLHS SVVNTPTVEG
ADFPYMPPYL NNGNTQFRDQ DNYPAIKPPW GTLNAINLNT GEYLWQVPLG EYPELSKKGI
PPTGTENHGG PIVTAGGLVF IAATYDEKLR AFDKKTGKIV WEYKLPAGGF ATPITYMVNG
KQYIVIAAGG TRYGLKPGGS YVAFALP