| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3951 |
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| Symbol | |
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| ID | 8727709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4740494 |
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| End bp | 4741969 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003388740 |
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| Protein GI | 284038810 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.108472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TATTGATCTG TTTACTCGCT GCCGCGCTGG CAACGGGCTG CAAAAATTAC
CTCAACGAAG ACACTACCGG CCTGTTGTAC GGCCCCAACG TACTATCCAC GCAGGACGGT
CTGGAATCGG CGCTGACGGG CGCTTACAAG GGGCTGGGTT CTCAGTGGTC GTATGGATTC
ATCCACCCAT CGGCCAATGC TGCCGTGCTG GGGGCCGACG ATGTGACCAC CCACCCGGCC
AGTAACAAGG CCGACTGGCG GGAGTTCGAT CAGTTCAACG TGTCGACCAC TAACCAGCGG
TCGGGGGCGG TGTACAATGG CTGTTACAAA GCCATTCAGG GGGCAAATAA CGTGATTAAC
AACTACTCGA AAACGGTGGG TACCAAGGCC ACGATTGACA TCATTGCGGG CGAAGCCTAC
TTCATCCGGG GCTTTTCGTA CTACTGGCTG ACACGTTTCT ACGGGAACAT TCCGCTCGTT
ACGGCGGGTG AGTACTCCGA TAGTTTGCTG ACGATCAAGA AGTCGACGGT GGCGCAGGTA
TACGACCTGA TCGTAGCTGA CCTGAAGAAA GCCGAAACGA TGCTGCCCAA CACCCGACGC
GATCCGGGTC GGCCAAACGC GGGCTCGGCG AAGGCATTTC TGGCCGACGT GTACCTGACG
ATGGCGGGCT GGCCCCTGAA ACAAACCGAT AAGTATGATC TGGCAGCTGC TAAAGCCAAA
GAGGTGATCG ACAACCGCGC TTTGTACGGT TTTCAGTTGA TGCCGACGTT TGCGGCCGTC
TTCGAAAACG ACCCGGCGGT GGCGATCATT CCTGAGTCGG TCTATCAGAT CAGCGGCTTT
GCGGCCGGTA GCGGCACAGC GAATGCAACC TACGGCAACA CCGCCATGCC CGGCGAAGAA
GGTGGCTGGG ACGATATGTT TGCCGAGCTA AACTTCTTTA ACACCTTCCC CGAAGGCCCC
CGCAAGGACA AGACATTCCG GACTCAGTTT GGTTTGGGAG CCACCACCAT TCCGTGGCAG
CAAAGCCTGA CCCGGCACCC ATATTACCAG AAATGGTACA TCAAGGGAAA CATCGTCACG
TCGAGCATTT CGCTGCCCTC GGTCATGATG CGCTACGCCC ACGTATTGAC CATCTACGCC
GAAGCCAAAG CACGCGGCAC GGGTGGCCCC GACCAGGCCG CTTACGACGC CCTCAATCAG
GTACGACTAC GCGGACGGGC CGCCGGAACG AAAGCCATGT CGCCCGCCGA CGGATTGACC
GCCAGCCAGT TTGCCGACGC CGTCGTGGAA GAGCGGGCCT GGGAATTTGC CGCCGAGCGC
ACCCGCTGGT TCGACCTCGT CCGGCTCGAA CAGGTGGAAG CGGCCAACGC CAAAAAGAGC
CCCGAAGACC TGCAACCGAT CAAAGCGATT ACAAAAGCCA ATTACTGGTT CCCGATGCCG
TATAGTGACA CGTCGCTGAA CCCGAATTTG AATTAG
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| Protein sequence | MKKILICLLA AALATGCKNY LNEDTTGLLY GPNVLSTQDG LESALTGAYK GLGSQWSYGF
IHPSANAAVL GADDVTTHPA SNKADWREFD QFNVSTTNQR SGAVYNGCYK AIQGANNVIN
NYSKTVGTKA TIDIIAGEAY FIRGFSYYWL TRFYGNIPLV TAGEYSDSLL TIKKSTVAQV
YDLIVADLKK AETMLPNTRR DPGRPNAGSA KAFLADVYLT MAGWPLKQTD KYDLAAAKAK
EVIDNRALYG FQLMPTFAAV FENDPAVAII PESVYQISGF AAGSGTANAT YGNTAMPGEE
GGWDDMFAEL NFFNTFPEGP RKDKTFRTQF GLGATTIPWQ QSLTRHPYYQ KWYIKGNIVT
SSISLPSVMM RYAHVLTIYA EAKARGTGGP DQAAYDALNQ VRLRGRAAGT KAMSPADGLT
ASQFADAVVE ERAWEFAAER TRWFDLVRLE QVEAANAKKS PEDLQPIKAI TKANYWFPMP
YSDTSLNPNL N
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