Gene Slin_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3940 
Symbol 
ID8727698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4722278 
End bp4723336 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content52% 
IMG OID 
Productarsenical-resistance protein 
Protein accessionYP_003388729 
Protein GI284038799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.29771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.461155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCG AAACGCTACC GGGTAAACCC GTCAACCGAC AGCTTTCTTT TCTGGACCGC 
TACCTCACGC TCTGGATATT CGGAGCGATG GCTCTGGGTA TTCTGCTGGG GAACCTGTTT
CCTCAAATTG AGCAATCCCT GAATGCCTAC CAGCAGGGTA CAACCAATAT TCCGCTGGCC
ATTGGCCTGA TCCTGATGAT GTATCCGCCC CTGGCCAAAG TCCGGTACGA CCAGTTGCCT
CAGGTATTCC GAAACAGAAA AATCCTGCTT CTTTCGCTGG TACAAAACTG GCTTATTGGC
CCGGTATTGA TGTTTGTACT GGCCGTTTTA TTATTACCCG ACAAACCCGA ATACATGACC
GGTCTGATCA TGATCGGCAT AGCGCGTTGT ATCGCCATGG TCATTGTCTG GAATGATCTG
GCCCTCGGCG ACCGCGAATA CGTAGCAGGA CTGGTGGCCT TTAACAGCGT CTTTCAGGTC
CTTTTCTATT CGGTCTATGC CTACGTTTTT GTTACGGTAC TACCTCCCCT ATTCGGTTTA
CCCGGCATGG CAGTCGACAT CAGTATCGGT CAGATTGCCG AGAGCGTGTT CATCTACCTG
GGTGTTCCGT TCCTGGCAGG TATGTTGTCT CGTTGGTCAC TGACCCGGTG GAAAGGGCAG
TACTGGTACG AAACCCGCTT CCTGCCAGCC ATCAGCCCTA TTACACTAGT GGCCTTGCTC
TTTACCATCG TGGCCATGTT TAGCCTGAAG GGTCGTCTGG TGCTGGAATT ACCAGGCGAT
GTATTACGAA TAGCCCTGCC GCTGGTTGTC TACTTCGGGC TGATGTTCTT TGCCGCTTTC
TACCTGGCTA AACGCGCTGG AGCCGATTAT CCTAAAAGCA CGTCGCTCGC CTTTACAGCC
GCTGGCAATA ATTTCGAACT GGGCATTGCC GTAGCTATTT CTGTGTTCGG CATCAACTCC
GGCGTAGCGT TTGCCGCTGT TATCGGGCCG CTGATCGAAG TACCCGTTCT GATTCTGCTA
GTCAGTTTTG CGCTTAAACA GCAACCTAAG TTTAGTTGA
 
Protein sequence
MNTETLPGKP VNRQLSFLDR YLTLWIFGAM ALGILLGNLF PQIEQSLNAY QQGTTNIPLA 
IGLILMMYPP LAKVRYDQLP QVFRNRKILL LSLVQNWLIG PVLMFVLAVL LLPDKPEYMT
GLIMIGIARC IAMVIVWNDL ALGDREYVAG LVAFNSVFQV LFYSVYAYVF VTVLPPLFGL
PGMAVDISIG QIAESVFIYL GVPFLAGMLS RWSLTRWKGQ YWYETRFLPA ISPITLVALL
FTIVAMFSLK GRLVLELPGD VLRIALPLVV YFGLMFFAAF YLAKRAGADY PKSTSLAFTA
AGNNFELGIA VAISVFGINS GVAFAAVIGP LIEVPVLILL VSFALKQQPK FS