Gene Slin_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3935 
Symbol 
ID8727693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4718887 
End bp4719717 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content50% 
IMG OID 
Productphosphoesterase PA-phosphatase related protein 
Protein accessionYP_003388724 
Protein GI284038794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.554114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.391722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TCAGTGTACT TGTCTTTTTA TCCCTCTCTT TAACGAATGT ATCTGGTCAG 
GCGGATACCA CAAAGCAAAA GGTTTATCGG GTAAGTCTGC CCTATGAAGG GGGTGGATCG
TTAGTCTTCA TCGGCGTTTC GGCTCTGGGA TTCAAACAAC TGGATCGCGT CGCGTCCTTC
GATCAGGCCG ATGTCGTTCA TCTTGATCCA AACTCCGTTA ATGCCTTCGA CCGGTCGGTT
ATCTTCAACA ATCCGGCGAA CTACGACCGG GCGCAAAAAC GGTCGGATCT TTTCCTGAAT
GTATCCATCC TCAGTCCGCT GCTGTTGATG GCCGATAAGC GAATCCGAAA AGACTGGCTC
GATCTGCTGA CCCTGTACGT CGCAACGCAT GCCGTAGATA ACGCGATCTA TTTTGCATCG
GCCTATTCCG TTCGGCGAGC CAGACCCTTT ACCTACAATC CGGACGTGCC GCTGGAAACA
AAAGTCGGGG TGGCTAAAAG TAATTCGTTC TACAGCGGTC ATGTGTCCTT CAGCTCAACG
GCCACGTTCT TTCTGGCCAA GGTGTTTACG GACTACCATC ATATTAAAGG CTGGAAACGG
GTCGCCATTT TTTCGCTGGT GAGCGTTCCG CCAGCCCTGG TTGCCTATAA TCGAATGGAA
GCGGGTAAAC ATTTCAAGAC CGATGTCATG CTGGGGTTTG CCGTTGGAGC AGCCTCGGGC
ATCCTTATTC CAGAATTACA CAAGCGAATA AAACAGTCCA AGTCAGTAGC CCTGGAGCCC
TTTTTTTCAG CGACCGGGCA AAAAGGGCTG ACACTTAATT ATCATTTCTA G
 
Protein sequence
MKLLSVLVFL SLSLTNVSGQ ADTTKQKVYR VSLPYEGGGS LVFIGVSALG FKQLDRVASF 
DQADVVHLDP NSVNAFDRSV IFNNPANYDR AQKRSDLFLN VSILSPLLLM ADKRIRKDWL
DLLTLYVATH AVDNAIYFAS AYSVRRARPF TYNPDVPLET KVGVAKSNSF YSGHVSFSST
ATFFLAKVFT DYHHIKGWKR VAIFSLVSVP PALVAYNRME AGKHFKTDVM LGFAVGAASG
ILIPELHKRI KQSKSVALEP FFSATGQKGL TLNYHF