| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3928 |
|---|
| Symbol | |
|---|
| ID | 8727686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4711356 |
|---|
| End bp | 4712369 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | zinc-binding alcohol dehydrogenase family protein |
|---|
| Protein accession | YP_003388717 |
|---|
| Protein GI | 284038787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG TAGGATTTAA GACATCGCTC CCCATTTCAG AAGCCGAGAG TTTTATCGAC
GTTGACCTTG AGAAACCCGC TCCGGGCGGT CGTGACTTGC TGGTGAAGGT CGACGCCATC
TCCGTCAATC CGGTGGATTT TAAAATTCGG CAGAACTCAG CGAAGGATAC CGTGCTGGAA
CAGCCCAAAA TCATTGGCTG GGATGCCGTG GGTGTGGTGG AAGCCGTGGG CAGCGATGTT
AGTCTCTTCA AGGTGGGCGA TGCCGTGTAC TACGCCGGGG ATATTACCAG ATCGGGCAGT
AATGCCGAAT ATCAGCTAAT CGACGAACGG ATCGTGGGCC GCAAGCCAAC TACGTTATCA
AACGAAGCGG CTGCTGGTAT TCCATTGACG GCCCTCACCG CCTGGGAGAT CTTCTTCGAC
CGGATGCGGC TTTCGCCCGA ACGCGACCGA AACAAAACCC TGCTCATCAT CGGCGGGGCC
GGGGGTGTTG GCTCCATTGC TATTCAACTG GCAAAAAAAC TGCTGGGACT GCACGTCATC
GCCACCGCAT CGCGTCCCGA AACAATTGAC TGGTGCAAAA AAATGGGGGC CGATCTGGTC
GTTAACCATC GAAACCTGAT TGACGAGGTT CGAAATGCCG GTTTTCAGTA CGTTGACTAC
ATCGTGGATT TTGTGGACAC CAACGGCTAT TGGGATACGC TGGCCGAACT CATCAAACCT
CAGGGGCACA TTGCCTCCAT TACGGGTAGT GCCGCGCCCG TTGTGCTGAA CAAGCTCAAA
AATAAAAGCG TCAGCTTTTC GTGGGAGTTC ATGTTCACGC GATCTACCTA CCAGACCGAC
GATATGATCG AGCAGCACCA CATCCTGAAC CAGGTGGCCG ACCTGCTGGA CGAAGGTGTG
CTTCAACCGA CGGTCACCCA AACCCTGCAT GGCCTGACGG CTGATGCGCT GAAGCAGGCC
CACGCGCAGC TTGAGTCGGG CACAACGATT GGGAAACTGG TTATCTCGTT CTGA
|
|---|
| Protein sequence | MKAVGFKTSL PISEAESFID VDLEKPAPGG RDLLVKVDAI SVNPVDFKIR QNSAKDTVLE
QPKIIGWDAV GVVEAVGSDV SLFKVGDAVY YAGDITRSGS NAEYQLIDER IVGRKPTTLS
NEAAAGIPLT ALTAWEIFFD RMRLSPERDR NKTLLIIGGA GGVGSIAIQL AKKLLGLHVI
ATASRPETID WCKKMGADLV VNHRNLIDEV RNAGFQYVDY IVDFVDTNGY WDTLAELIKP
QGHIASITGS AAPVVLNKLK NKSVSFSWEF MFTRSTYQTD DMIEQHHILN QVADLLDEGV
LQPTVTQTLH GLTADALKQA HAQLESGTTI GKLVISF
|
|---|
| |