| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3926 |
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| Symbol | |
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| ID | 8727684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4709676 |
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| End bp | 4710389 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003388715 |
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| Protein GI | 284038785 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.566728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTAC CCATTCGTTG CCTTGTTGTC GACGATAAGC CCCTGGCACT CGACATTCTG
ACCAATTACA TCGGCAAAGT GCCTTTTCTG CACCTGGCAG CGGCAACGAC GAACCCACTC
GACGCGCTGA CGCGGGTGGC CCAAGAACCG ATAGACCTGA TTCTTCTGGA TATTCAAATG
CCGGAACTGA CCGGCCTTCA ATTTCTTACA GCCCTCAACA GCCGTTCGCG GGTGATTTTA
ACGACAGCCT ACGCCGAATA TGCCCTGGAT GGCTTTGAAC ACGATGTGGT AGATTACCTG
CTCAAGCCGA TATCGTTTGA GCGATTCTAT CGAGCGGTCC TGAAAGTTCA GCAGCAGATG
CGGCCTTCGC CCGATCTGCC ACTTGAGCAG CGTGCTTACC TGTTCATTCG TACCGAGCAC
CGAATGCAAC GGGTCGATAT AGCCAATATC CTATATGCAG AGGGTTTGCA GAATTACACC
GTAGTGCATA CCGTGGCCGA AAAAGTGATA GCCCGGCAAA CATTTGGCAG TTTAGAGAGT
AATCTGCCAC CCTCGGCTTT TGTCCGGGTA CATAAATCAT TTATTGTAGC CCTGGCCCAT
ATTTCTACGG TTGAACGGAG TCGTATTTAC ATCAAAAATG GCAATCAGGA ACCGGTAAAC
ATCCCCATTG GCGATGCCTA CCGGGAGAGA TTCTACAAGT TATTAGGCAT GTGA
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| Protein sequence | MTLPIRCLVV DDKPLALDIL TNYIGKVPFL HLAAATTNPL DALTRVAQEP IDLILLDIQM
PELTGLQFLT ALNSRSRVIL TTAYAEYALD GFEHDVVDYL LKPISFERFY RAVLKVQQQM
RPSPDLPLEQ RAYLFIRTEH RMQRVDIANI LYAEGLQNYT VVHTVAEKVI ARQTFGSLES
NLPPSAFVRV HKSFIVALAH ISTVERSRIY IKNGNQEPVN IPIGDAYRER FYKLLGM
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