| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3911 |
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| Symbol | |
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| ID | 8727669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4687474 |
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| End bp | 4690755 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_003388700 |
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| Protein GI | 284038770 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.25512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0971599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGGT TCGTTGTTTT TAGGTGGCTC CTCCTGCTAT TGTGCCTATC CGCGTCTGCC
GGGCAGGCAC AATCCACGGT GCTTTACTTC GACGAACCCC CCAAAGAGAC GCTGGGCCGC
AACCGAAATC AATTAACCAT CAATCAATTC TTTACCGACC GCGACGATTT TCTCTGGTTC
GTCGGCGGCA GTGGCCTGAG CAGGTACGAC GGCCATGAGA TCGTAACGGT GCGCTCCGAT
CCGGCGGATT TGAACTCCCT CTCCTCGGCG CGGGTGGCGG ATATGATTCA GGACGAGCGA
GGCACGTTTT GGATAACCAC CCGCGACGGG GGCCTTAATG CCTACAATCA GCAAACGGGC
AACGTGACCC ATTTTCAGCA CCAGCCTACC AACAAAACCA GTTTATCATC AGATAAGCTC
CGATTTCTTC AACGCGATGA ATCCGGTTAT CTCTGGATTG GGAGCGATTA TGGCATGAAT
CGGTTCGACC CCAAAACGGG TAGCACTGTC CGTTTTTTGC TCAAACCAGG CGAGTCAGGG
CAGTTGCAGG GCAATCCGCT GTCGCCTATT CTGGTTGAAT CGCCGGGCCG GACTAGTCAA
GGCTACGTTT ACGTCTGTAC AACGGCTGGG TTCGAGCAAT TTGACCGAAC CAGTAACCGT
TGGCGGTGCT TTCCGACTGT CAATAAATCA GGTGTGCCCG TCATCAACGC TACTGATGGT
CTCAATGTGA CGAACGGCCT CTGTAAAGAT CGTCGGGGCC TGATCTGGAT GGGTGTTCCG
GGCCAAACCG GGCTGCGGGT TTTTAACCCT AAAACAGGGC AGATCAATTG GTTCGATAAG
CGAACGGCCG GTGGCAAACC CATTCCGTTT CCGAACGTGA TTCTGGAGGA TCGGGCGGGG
CGGCTTTGGC TTTGCTGCGA TAACGACATC TTCCGCATTT CAGCCGACCG GACCGTTGTG
GAGCAATGCA CACCCGTAGC CATCAGCAAT GGGGAGCAAC TCAAGGAATT TGTAACCCTC
TACGAAGATA GACAGGGGTT AATCTGGCTG GAAAGGGCAA GCGACAAAAA TCCGCTTTTT
TTCGATCCCC GTCAGGAACG CCACCCCAAC ATTCCACTAC CCAAATTTAC TAACACCGCC
GGTGCGATTC CGACACGACC CGTAACGGAG TCCCTCATGC CCGACTCGGA AGGCTTCCTT
TGGATCAGTA CCGATCTGGG CCTGATTTGC TACAAGCCGG GCCCGGCCTG GACTGGCCAA
TCCAGGCCGG GCCAATCCAG GCGGGACCGG AATCAGATGA AGGTTGTCCT GAAGCAACCC
CTCACCTATT TCACCAGCCC GCTGCCTGGT GCGACCGTGA CCAGCCACGA TCCATATCTG
CTGGTTGGTG CGGAGGCTGG CCTGTTTGTT TACAACAAAA AGACGGGTCG TCTCACACCT
GTCCGTTTAG ACAAGGCCGG GACTAAGACG ATCCCGAATG CCATCGCTTC GGTTATTGAC
GGGGATGGCG ACCTCTGGAT TTCAACCTGG GGGAAAGGAC TTTTCCGTAT TCCGAAGGGC
AGTTTATCGG TCGAGACGGG GCTGGTGAGT ACCTATGAAC AGTGGAAAAA CGATCCCACC
AATGCCAACA GCCTATTGTC GAACACGCTG CAAAAGATTG CGGTCGATGC GCAGAACACG
GTATGGGTGT GCGGAGCCGC TCACGGCCTT AGTCGGGTAA ATAAACGAAC CCGGAAAGTG
CAGCGGTTTG TACTCCGGCA AGGTGACCCC TACGGACTGG CCAGCAACTA CACCTTCGCC
CCCCTGGTTG ATAAGCAGGG TGATGTATGG ATAACGAGTG GGTATGCGGC TCCCTTACAG
AAGCTGTCGG TCAAAACGGG GCGATTCAAA AAATATGGCA TCGCCAACGG GTTTACGGAT
GATTATTTTG CCCACGCTAC CCTCGACAAA ACCGGCAAAA TCTGGTTCAA CCAGAACCAG
GTGGTATCCT GTATCGACCC CATTACGGAG CGCGTAACCA CGTTTCCGCA GTTTGTTGGC
AACTCGGTTT ACTCGACGCC CATTACAGCA CTGGCTACTA CCGGCGAGAT TTATTTCGGT
TGCCAGAATA ACTTACGGCG GTTTGGGCCA AACGATACCA TCCACAGCAT CCCTAAAGCC
TCATCACCGC TACGATTGGT GAGCGTTTCC TGCTTCGACA CCGACGGAAC GCAAACCATG
CGACCCTTAC CCCCGGATCG CTGGCGCTCC AATGAGCTGA CATTGTCGCA CCAGGAAAAC
ACTTTAGAAC TAAAATTTGC GCTGCTGGAT TACCGCAACA CCAGCAGTCG TGCCTATGCC
TATTCCCTGA CCGGACCGAA TGACGAGCCA AAATGGGTAA GAATCGGCTT GAAAAACACC
GTTGATTTTG CCCAGATGAA GCCGGGCACG TACCTGTTCC ACTTGAAAGC CCGCAATAGC
GACGGTATTT GGGCAAATCT AGCGCCCCTC CGCATACACA TCAGCCCACC CTGGTGGCAA
ACCCTTTGGG CCTATGCCGC TTATGCGCTG CTGCTGCTAC TCGGCTTTTG GTATTTACTG
AAGGTCCGTC TGCGTGAACA AGCCCGCGAA CTGGCCCTGC AGGAAGCCGT CGTCATTAAA
CAACAGCGCG ACGAGATTGC TCAGAAAAAC GCCCAGAACG AACTCCTGCT GAAAGAGATT
CATCATCGGG TCAAAAATAA CCTGGAAGTG GTGTCAAGTT TGCTGGCCTT GCAATCGGCT
AAAGTTACTG ACCCCAACGT ACAGGAAGCC ATACAGGCCA GTCAAAACCG GGTGCAGAGT
ATGGGTATCA TTCACCAGAA ACTGTACCAG GGCAAGCAGT TAGGGGCTAT CGAAATGCGC
GATTATTTTC TTAACCTCAG CGAAAGCATA CTCGATTCGT TCGATGTCGC CAGTCGCGTC
ACCATCAATT GTTCGATGCC CGAGCTGGAA CTGGATATTG ACACGGCGGT TTCCATAGGA
CTGATAACGA ATGAGTTGAT AACTAACTCG CTTAAATATG CCTTTATCGG TAGAGACAAC
GGCACCATTC GCATCAGCCT GACGCGGATG GGCGACGATT CGTTGCTGTT GATGGTAGCC
GACAATGGTA TCGGTAAACA GCCTATGGAA GCAGTCAATG AAACGGGCTT CGGCACCCAG
TTGGTGGAGC TACTAACCCG CCAGCTCGAT GGTGTGCTTA CCTACGAAAA CCAGACTGGG
ACGGTAGTCA AACTCCTCTT CAACCGGCCA GCCATTGCCT AA
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| Protein sequence | MNGFVVFRWL LLLLCLSASA GQAQSTVLYF DEPPKETLGR NRNQLTINQF FTDRDDFLWF
VGGSGLSRYD GHEIVTVRSD PADLNSLSSA RVADMIQDER GTFWITTRDG GLNAYNQQTG
NVTHFQHQPT NKTSLSSDKL RFLQRDESGY LWIGSDYGMN RFDPKTGSTV RFLLKPGESG
QLQGNPLSPI LVESPGRTSQ GYVYVCTTAG FEQFDRTSNR WRCFPTVNKS GVPVINATDG
LNVTNGLCKD RRGLIWMGVP GQTGLRVFNP KTGQINWFDK RTAGGKPIPF PNVILEDRAG
RLWLCCDNDI FRISADRTVV EQCTPVAISN GEQLKEFVTL YEDRQGLIWL ERASDKNPLF
FDPRQERHPN IPLPKFTNTA GAIPTRPVTE SLMPDSEGFL WISTDLGLIC YKPGPAWTGQ
SRPGQSRRDR NQMKVVLKQP LTYFTSPLPG ATVTSHDPYL LVGAEAGLFV YNKKTGRLTP
VRLDKAGTKT IPNAIASVID GDGDLWISTW GKGLFRIPKG SLSVETGLVS TYEQWKNDPT
NANSLLSNTL QKIAVDAQNT VWVCGAAHGL SRVNKRTRKV QRFVLRQGDP YGLASNYTFA
PLVDKQGDVW ITSGYAAPLQ KLSVKTGRFK KYGIANGFTD DYFAHATLDK TGKIWFNQNQ
VVSCIDPITE RVTTFPQFVG NSVYSTPITA LATTGEIYFG CQNNLRRFGP NDTIHSIPKA
SSPLRLVSVS CFDTDGTQTM RPLPPDRWRS NELTLSHQEN TLELKFALLD YRNTSSRAYA
YSLTGPNDEP KWVRIGLKNT VDFAQMKPGT YLFHLKARNS DGIWANLAPL RIHISPPWWQ
TLWAYAAYAL LLLLGFWYLL KVRLREQARE LALQEAVVIK QQRDEIAQKN AQNELLLKEI
HHRVKNNLEV VSSLLALQSA KVTDPNVQEA IQASQNRVQS MGIIHQKLYQ GKQLGAIEMR
DYFLNLSESI LDSFDVASRV TINCSMPELE LDIDTAVSIG LITNELITNS LKYAFIGRDN
GTIRISLTRM GDDSLLLMVA DNGIGKQPME AVNETGFGTQ LVELLTRQLD GVLTYENQTG
TVVKLLFNRP AIA
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