Gene Slin_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3902 
Symbol 
ID8727660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4681089 
End bp4681601 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388691 
Protein GI284038761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0447997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA ACCAATCCGC CCTGATGCTG GCCGCTTTTG CCGCCCTGAT TATAGTTGCC 
GCCGGTTGCA ACGCCCCCAC CCAAAAACAG GAAACTGCGA CGGAACAGGC AGCTGCTAAA
CCCGACATGG CCGCGCTGAA AGCAGAGATT CAGGCCATCG AAACCGAATG GGCCAGCGCA
ACAACAGCTA AGGACATCAA CAAAGTAATA TCGTTCTATG CGGACGATGC CGTGGAAATG
AATGACGATG AACCGATGCA AGTTGGCAAA GCCGCCATTC AACAGTCATT GCTTAAAAGT
ATGGAAGCAC GCAAGGCTGG CACTACGGTT TCCTTTGAGA CGATGGACGT GTACGGCGAT
GGTAACGTAG TGACCGAAGT CGGAAAGACG ACGACCACCG ATGCGGCTGG CAAGGTGGTC
AGTGCCGGAA AGTATGTGGG CATCTTCGAA AAACGCGACG GAAAATTTAT CTGCATCCGC
GACATCAACA ACGAGGATCA GAAGGGCAAG TGA
 
Protein sequence
MKTNQSALML AAFAALIIVA AGCNAPTQKQ ETATEQAAAK PDMAALKAEI QAIETEWASA 
TTAKDINKVI SFYADDAVEM NDDEPMQVGK AAIQQSLLKS MEARKAGTTV SFETMDVYGD
GNVVTEVGKT TTTDAAGKVV SAGKYVGIFE KRDGKFICIR DINNEDQKGK