Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3895 |
Symbol | |
ID | 8727653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4674306 |
End bp | 4675418 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Mannonate dehydratase |
Protein accession | YP_003388684 |
Protein GI | 284038754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.616803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAACT CGCGTCGTCA TTTCCTGAAA AATAGTGCCT CTGCAGCCGC CCTATCGCTG GCGGGTCCGC AACCCGGTGC GCTCAGCCAA CAGACTTCTT CTCCCCTCGC TTACGTCAAA GACGGCGGCA TGCAGCTTTG TCTGGCTCAT TTTTACGGCA TGGATAAACG GCGCATCGAA CTGTCGAAAC AGCTTCAGGT GCTGAACGCG GTAGGGGGCA TTAACGCCCG GCCGCTGGGC ATTACCGACG CTCAGCCGTG GGAGTACAAA GCCATCATGG CGGTTAAAGA GGCCTGGGCC AAAGAAGGGC TGACGTTTAA GGTCGTTGAA GGGCCACCAG CCCTCTACGA AAAAACCAAG CTGGGGCTAC CCGGTCGGGA TGAAGAGATC GACAACTTCA TTCTATTTAT CCGAAACCTG GCCAAAACGG GCATCGATAC CATCTGCTAC AACTGGATGC CCGTTATCAG TTGGGCGCGT ACCAGTCTGG ACCGGCCCAG CCGGGGCGGG GCGCTGGTGA GTGCGTTCGA TATCGACAAC ATTAAAGACA ATAGTCTGAC GACCTTCGGC GCCTTTACAA AGGACGCCAT GTGGAAAAAC CTGGAGTACT TCCTGAAAGC CGTGGTGCCG GAAGCCGAGA AGAACGGCAT CAAACTGGCC CTTCACCCCG ACGACCCGCC AGTGGATGCC ATCCGGGGAA TTCCGCGGAT CATGACCTCA GCCGATGCCT TCAAGCGAAT GATCGAACTG GTACCCAGCC CCAGCAATGG CATTACACTC TGTCAGGGTA CGTTTGCGAC CATGGGCGAG GATATCCCAT CGGTCATCAA CTACTTTGGC AAACGCGGTA AGATCCATTT CGTGCATTTC CGCGACGTGC GGGGCGACCG TAATCACTTT GAGGAAACCT TCCACGACGA CGGCAAAACC AATATGTACG AAGCCATGAA AACCTACTAT GACATTGGTT TCCGGGGACC CATGCGCCCC GACCACGTGC CGACCATGGC TGGCGACAGC AACGAACACC CCGGCTACAG CAACATAGGG GTGCTCTTTG CCATTGGGTA CATGCGCGGC TTACTCGAAG CTATTGCCAG ACAACACCGG TAG
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Protein sequence | MKNSRRHFLK NSASAAALSL AGPQPGALSQ QTSSPLAYVK DGGMQLCLAH FYGMDKRRIE LSKQLQVLNA VGGINARPLG ITDAQPWEYK AIMAVKEAWA KEGLTFKVVE GPPALYEKTK LGLPGRDEEI DNFILFIRNL AKTGIDTICY NWMPVISWAR TSLDRPSRGG ALVSAFDIDN IKDNSLTTFG AFTKDAMWKN LEYFLKAVVP EAEKNGIKLA LHPDDPPVDA IRGIPRIMTS ADAFKRMIEL VPSPSNGITL CQGTFATMGE DIPSVINYFG KRGKIHFVHF RDVRGDRNHF EETFHDDGKT NMYEAMKTYY DIGFRGPMRP DHVPTMAGDS NEHPGYSNIG VLFAIGYMRG LLEAIARQHR
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