Gene Slin_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3895 
Symbol 
ID8727653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4674306 
End bp4675418 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content56% 
IMG OID 
ProductMannonate dehydratase 
Protein accessionYP_003388684 
Protein GI284038754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.616803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAACT CGCGTCGTCA TTTCCTGAAA AATAGTGCCT CTGCAGCCGC CCTATCGCTG 
GCGGGTCCGC AACCCGGTGC GCTCAGCCAA CAGACTTCTT CTCCCCTCGC TTACGTCAAA
GACGGCGGCA TGCAGCTTTG TCTGGCTCAT TTTTACGGCA TGGATAAACG GCGCATCGAA
CTGTCGAAAC AGCTTCAGGT GCTGAACGCG GTAGGGGGCA TTAACGCCCG GCCGCTGGGC
ATTACCGACG CTCAGCCGTG GGAGTACAAA GCCATCATGG CGGTTAAAGA GGCCTGGGCC
AAAGAAGGGC TGACGTTTAA GGTCGTTGAA GGGCCACCAG CCCTCTACGA AAAAACCAAG
CTGGGGCTAC CCGGTCGGGA TGAAGAGATC GACAACTTCA TTCTATTTAT CCGAAACCTG
GCCAAAACGG GCATCGATAC CATCTGCTAC AACTGGATGC CCGTTATCAG TTGGGCGCGT
ACCAGTCTGG ACCGGCCCAG CCGGGGCGGG GCGCTGGTGA GTGCGTTCGA TATCGACAAC
ATTAAAGACA ATAGTCTGAC GACCTTCGGC GCCTTTACAA AGGACGCCAT GTGGAAAAAC
CTGGAGTACT TCCTGAAAGC CGTGGTGCCG GAAGCCGAGA AGAACGGCAT CAAACTGGCC
CTTCACCCCG ACGACCCGCC AGTGGATGCC ATCCGGGGAA TTCCGCGGAT CATGACCTCA
GCCGATGCCT TCAAGCGAAT GATCGAACTG GTACCCAGCC CCAGCAATGG CATTACACTC
TGTCAGGGTA CGTTTGCGAC CATGGGCGAG GATATCCCAT CGGTCATCAA CTACTTTGGC
AAACGCGGTA AGATCCATTT CGTGCATTTC CGCGACGTGC GGGGCGACCG TAATCACTTT
GAGGAAACCT TCCACGACGA CGGCAAAACC AATATGTACG AAGCCATGAA AACCTACTAT
GACATTGGTT TCCGGGGACC CATGCGCCCC GACCACGTGC CGACCATGGC TGGCGACAGC
AACGAACACC CCGGCTACAG CAACATAGGG GTGCTCTTTG CCATTGGGTA CATGCGCGGC
TTACTCGAAG CTATTGCCAG ACAACACCGG TAG
 
Protein sequence
MKNSRRHFLK NSASAAALSL AGPQPGALSQ QTSSPLAYVK DGGMQLCLAH FYGMDKRRIE 
LSKQLQVLNA VGGINARPLG ITDAQPWEYK AIMAVKEAWA KEGLTFKVVE GPPALYEKTK
LGLPGRDEEI DNFILFIRNL AKTGIDTICY NWMPVISWAR TSLDRPSRGG ALVSAFDIDN
IKDNSLTTFG AFTKDAMWKN LEYFLKAVVP EAEKNGIKLA LHPDDPPVDA IRGIPRIMTS
ADAFKRMIEL VPSPSNGITL CQGTFATMGE DIPSVINYFG KRGKIHFVHF RDVRGDRNHF
EETFHDDGKT NMYEAMKTYY DIGFRGPMRP DHVPTMAGDS NEHPGYSNIG VLFAIGYMRG
LLEAIARQHR