| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3860 |
|---|
| Symbol | |
|---|
| ID | 8727618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4632194 |
|---|
| End bp | 4633678 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_003388649 |
|---|
| Protein GI | 284038719 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.182724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGAT ACGTTCAACA GTTAAAAATT TCCGTTGACC GCCAGACCGT CCTATTTGCC
TTTTTAGGGG CGTTAGTGGC GCTGGGCACC GGCTTAATTA TTGCCGAGCG AGAATTAAAA
GGAGCCGTCA TCATCCTGCT GATTCCCATG GCGCTGGCAG TAGTATTCCT ATGTTTGTAT
AGACCTAAAT TAGGGTTGTT CATTTACCTG CAATACGCCT TTATCGTTAA CGGCATACAG
CGCTTCAGTC CGGTCGTAGC GCCGTATGGG TTGCTGGCCG ACGGGCTGCT GTTATTGCTG
CTGATTGGCG TTGTGATCAA CTACAAACAG TTCGACTGGA AAAACCTGCA TAACCCGGCG
TTCTATTTGA TTCTTTTCTG GACGCTATAC ACCTTTCTGC AATTATTCAA TACGGAGTTA
CCCGTGCTGG GAGCCTGGTT CTTTGCCGTA CGTGCCGAAT CACTATACTG GTTCCAACTA
ACCATTCTGG GGCTGGTGTT GATTCGAACC AAAAAAGACA TCGACACTAT CTTCACCATC
TGGCTGATCT GGTCGGTCGT AGCGGCAATC TGGGCGTTCA GACAACGCTA CATCGGTCTG
ACAGCCGGCG AACAGCAGTG GCTTGATGCG GGAGCCAGCG TAACACACGT TTTGTTTGGG
CAGTTACGCT GCTTTTCGTT CTACTCAGAT GCCGGGCAGT TTGGGGCCGA AATGGCCTAT
GCTACTCTGC TCTGCATAAT ACGGGTACTG GATGAGCGTG TATTGCGCGT AAAGCTCCTG
TATCTGGGAA TTGGCCTGAT CGTGTTTTGG GGCTTTGCCG TATCGGGCAC CCGGGGTGCT
TTATTCGTTA TTCTGGCCGG TCTTCCCGTG TATATTATTT TACGGCGCAA CTTCGCAATT
CTCATTATTG GTATCCTGAT TGGCGGCTCT TTGTTTGGCA TGTTAAAGTA CACCTCCATA
GGCAGCAGCT TATACGAGAT TGAACGGATG CGCACCGCAC TGGACCCCGA GAACGACTCC
TTCCAGGTGC GGTTGGATAA TCAGAAAAAG CTGGTGGACT ATCTGGCAAC ACGGCCTTTC
GGCGGTGGTA TTGGCAGCTC GGGAGACTGG GCCCGCCGAT TTACGCCCAA TAGCTTTCTG
GCCGCAACAC CGCCTGACAG CTGGTATGTG AAAATCTGGA TTGAGAACGG CATCGTGGGC
CTTGTCATCC ACCTGGGTAT GCTGCTGTTC TTTCTGGCAC TGGGTATCTA TAACACAACA
AGGCCCGAAC TGGCAACCTA CGCCCCCGAT CTGAAGCTTT TACTGCTATC GCTTATCTGT
GGCTACGCTG GCATATTGGT TGCCTGTTAT GGTAATCCAA TCTTTGGTCA GTTTCCCACT
AATTCAATTA TGTCGATTAC CATTGTCCTG CTGTGTTCCA CTCATGTGAG TAGAGCATAC
ATAGAACAGG AAAAGAAACA GGTGCTTCAA CCCCAGGTAG TGTGA
|
|---|
| Protein sequence | MNGYVQQLKI SVDRQTVLFA FLGALVALGT GLIIAERELK GAVIILLIPM ALAVVFLCLY
RPKLGLFIYL QYAFIVNGIQ RFSPVVAPYG LLADGLLLLL LIGVVINYKQ FDWKNLHNPA
FYLILFWTLY TFLQLFNTEL PVLGAWFFAV RAESLYWFQL TILGLVLIRT KKDIDTIFTI
WLIWSVVAAI WAFRQRYIGL TAGEQQWLDA GASVTHVLFG QLRCFSFYSD AGQFGAEMAY
ATLLCIIRVL DERVLRVKLL YLGIGLIVFW GFAVSGTRGA LFVILAGLPV YIILRRNFAI
LIIGILIGGS LFGMLKYTSI GSSLYEIERM RTALDPENDS FQVRLDNQKK LVDYLATRPF
GGGIGSSGDW ARRFTPNSFL AATPPDSWYV KIWIENGIVG LVIHLGMLLF FLALGIYNTT
RPELATYAPD LKLLLLSLIC GYAGILVACY GNPIFGQFPT NSIMSITIVL LCSTHVSRAY
IEQEKKQVLQ PQVV
|
|---|
| |