Gene Slin_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3852 
Symbol 
ID8727610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4623054 
End bp4624019 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content47% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003388641 
Protein GI284038711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCCCT TGCGGCTTTT CTACACCTAC CTGCTCTTTT CGTCGAAAAC GCAGAGCACG 
AATCTGCCAG ACATTATGCA ACCTTTAGTA TCCATAATTA CTGTTAACTA CGATCAGCCC
GAGGTGACCA GCCAATTGCT CAGGTCGCTC CAGCAGATTG ACTACCCCAA TACCGAAGTG
TTCGTGGTTG ACAATGGTAG TCCTAACCGG GGTATCGACT CGCTAATCAG TGAATTTCCA
GATACACACT TTATAAAAAG CACGAAAAAT CTGGGGTTTG CCGGTGGCAA CAATCTGGCG
ATAGAACATT GTAAAGGAAA GTATCTGCTC TTTCTGAACA ATGATACCGA GGTCGCACCC
GATTTTTTAC AGCCGCTGGT CGACTGTCTT GAAACGCAGC CTAACGCGGG CATGGCCAGT
CCTAAAATAA AGTTCTTTCA CGAAGAAAAC ATGATCCAGT ATGCAGGTTC GGGCAAAATG
AATCCCTATA CAGGACGTAG CTTTTTTGTA GGAAACCGGC AGGTCGACCA GGGGCAGTTT
GACACAACCC AGCTAACCCC TTTCATCCAC GGGGCGGCCA TGCTGATCTC CCGTAAAGTA
CTGCAAACCA GCGGGCTGAT GGATGATGAA TTCTTTCTTT ATTATGAAGA ATTCGACTGG
TGTGCCCGTG CTCAGCGCGA CGGATTTACA ACCTGGTACG TAGCCGAATC CGTAGTCTGG
CACAAAGAGT CTGTATCAAC GGGCAAGTAC AGCCCTTTAA AGCTGTATTA CCTGACCCGT
AACCGGCTGT ATTTCATGCG CCGAAACTTT CCTCTTGCTC AAAAATTGAT GTTTCTCAGC
TTCTTCACGC TGGTTTCAGT TCCCAAAAAC TCACTCTCAT TTCTATTGAC TCGTCGCTTC
GACTACCTGA ATGCATTTTG GAGCGGCCTG ATGTGGAATA TCACCCGGAA ATCCTCTTTG
TTATGA
 
Protein sequence
MLPLRLFYTY LLFSSKTQST NLPDIMQPLV SIITVNYDQP EVTSQLLRSL QQIDYPNTEV 
FVVDNGSPNR GIDSLISEFP DTHFIKSTKN LGFAGGNNLA IEHCKGKYLL FLNNDTEVAP
DFLQPLVDCL ETQPNAGMAS PKIKFFHEEN MIQYAGSGKM NPYTGRSFFV GNRQVDQGQF
DTTQLTPFIH GAAMLISRKV LQTSGLMDDE FFLYYEEFDW CARAQRDGFT TWYVAESVVW
HKESVSTGKY SPLKLYYLTR NRLYFMRRNF PLAQKLMFLS FFTLVSVPKN SLSFLLTRRF
DYLNAFWSGL MWNITRKSSL L