Gene Slin_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3846 
Symbol 
ID8727604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4614772 
End bp4616394 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content53% 
IMG OID 
ProductAmidase 
Protein accessionYP_003388635 
Protein GI284038705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC GGAGCTTTAT CAAGAACAGT TCAGTTGTCA GCCTTTCTGC CAGTACACTC 
ACCGTAGCGG CCTGCTCGTC GCCCAAACAG GCATCCACGG AAAAGGACTC CGCTGCCTTC
ACCGATGATT TTGAACTGAA CGAAGTAACC ATCGGCGATC TTCAAAAGAA AATGCAGTCG
GGCCAGTATA CAGCCGCTGC CATTACCCAG CTTTACCTGG ACCGTATCAA GGTCATCGAC
AAGCAAGGAC CGAGCCTGAA TTCGGTCATC GAACTCAACC CTGATGCTCT GTCGATTGCC
AACGCTATGG ATCAGGAGCG GAAAGCGGGC AAACTACGGG GGCCGCTTCA TGGTATTCCG
ATACTGATAA AGGATAATAT TGATACCGGC GACCAGATGA TGACAACTGC CGGTGCCCTG
GCTCTGGATG GCCATAAAGC GGCTAAAGAT GCTTTTGTCG CCAAAAAACT GCGCGATGCC
GGGGCTATCA TCCTGGGCAA GACAAACCTC AGCGAATGGG CTAACTTCCG CTCGACCCGG
TCGAGCAGTG GCTGGAGCAG TCGGGGTGGT CAAACCCGCA ACCCGTTTGT GCTCGACCGG
AGTCCGTGCG GTTCCAGTTC GGGATCAGGG TCGGCGGTGT CGGCTAATCT CTGCGCCGTG
GCAGTTGGCA CCGAAACGGA TGGCTCGGTC ATTGCCCCTG CCTCGTTTTG TGGCGTTGTC
GGGATTAAAC CAACGGTAGG GCTGGTGAGT CGCAGCGGCA TTATTCCCAT CTCAAAAACG
CAGGACACTG CCGGTCCAAT GACCCGAACG GTAACGGATG CGGCTATTTT GCTGGGTGCC
ATGACCGGTA TCGATCCGGC GGATGCCGTT ACGACTGAAA GCCAGGGCAA GGCCCTGACC
GATTATACCC AGTTTTTACG GGCAGACGGG TTATCAGGCA AACGCATTGG TGTCGAAAAA
TCCTTTTTGA AAGGGCACGA AGGTGTTGTT GGGCTGTTCA GGCAAGCTAT TGATGTCTTA
AAAAAACAGG GAGCCGTTAT CGTTGAGGTT GAGTTGCTCA ACCAGTTCAG TTCCATTGGC
GGGGCGGAGT TTACGGTACT CCAGTACGAA TTTAAAGATG GCGTAAACCA ATACCTGGCA
TCGGCCAATG CGGGTGTTAA ATCGCTGGCC GAGGTCATTG CCTACAATCG CAAAAATGAA
GCGAAAGCCA TGCCTTTCTT CAAACAGGAA ACCCTCGAAA GCAGCGAGGC CAAGGGTGGG
TTAAGCAGTA AAGAATATAC AGATGCGCTG GCTAAAACCC GAACGTCACG ACAATTGATC
GACAAACTAA TGGCCTCCGC TAAACTGGAT GCCATTTGTG GTACCAGCAT TGGTTTTGCG
GGCTGTATCG ACCTGATAAA TGGCGACTAC GACACCGGCT TCTATTTCTG TCCGCCAGCA
GCTATGGCCG GGTATCCGCA CATTACGGTT CCGATGGGCA CGGTACATGG GCTTCCTGTT
GGCCTTTCTT TTATAGCCAG CGCCTACCAG GAAGGCCCCC TCCTCAGCAT TGGCTATGCC
TATGAACAAG CCTCGAAAAA ACGAATTCGC CCCCCGTTTA CCAAATCGCT GATTCCAGGC
TGA
 
Protein sequence
MNRRSFIKNS SVVSLSASTL TVAACSSPKQ ASTEKDSAAF TDDFELNEVT IGDLQKKMQS 
GQYTAAAITQ LYLDRIKVID KQGPSLNSVI ELNPDALSIA NAMDQERKAG KLRGPLHGIP
ILIKDNIDTG DQMMTTAGAL ALDGHKAAKD AFVAKKLRDA GAIILGKTNL SEWANFRSTR
SSSGWSSRGG QTRNPFVLDR SPCGSSSGSG SAVSANLCAV AVGTETDGSV IAPASFCGVV
GIKPTVGLVS RSGIIPISKT QDTAGPMTRT VTDAAILLGA MTGIDPADAV TTESQGKALT
DYTQFLRADG LSGKRIGVEK SFLKGHEGVV GLFRQAIDVL KKQGAVIVEV ELLNQFSSIG
GAEFTVLQYE FKDGVNQYLA SANAGVKSLA EVIAYNRKNE AKAMPFFKQE TLESSEAKGG
LSSKEYTDAL AKTRTSRQLI DKLMASAKLD AICGTSIGFA GCIDLINGDY DTGFYFCPPA
AMAGYPHITV PMGTVHGLPV GLSFIASAYQ EGPLLSIGYA YEQASKKRIR PPFTKSLIPG