Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3846 |
Symbol | |
ID | 8727604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4614772 |
End bp | 4616394 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Amidase |
Protein accession | YP_003388635 |
Protein GI | 284038705 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAC GGAGCTTTAT CAAGAACAGT TCAGTTGTCA GCCTTTCTGC CAGTACACTC ACCGTAGCGG CCTGCTCGTC GCCCAAACAG GCATCCACGG AAAAGGACTC CGCTGCCTTC ACCGATGATT TTGAACTGAA CGAAGTAACC ATCGGCGATC TTCAAAAGAA AATGCAGTCG GGCCAGTATA CAGCCGCTGC CATTACCCAG CTTTACCTGG ACCGTATCAA GGTCATCGAC AAGCAAGGAC CGAGCCTGAA TTCGGTCATC GAACTCAACC CTGATGCTCT GTCGATTGCC AACGCTATGG ATCAGGAGCG GAAAGCGGGC AAACTACGGG GGCCGCTTCA TGGTATTCCG ATACTGATAA AGGATAATAT TGATACCGGC GACCAGATGA TGACAACTGC CGGTGCCCTG GCTCTGGATG GCCATAAAGC GGCTAAAGAT GCTTTTGTCG CCAAAAAACT GCGCGATGCC GGGGCTATCA TCCTGGGCAA GACAAACCTC AGCGAATGGG CTAACTTCCG CTCGACCCGG TCGAGCAGTG GCTGGAGCAG TCGGGGTGGT CAAACCCGCA ACCCGTTTGT GCTCGACCGG AGTCCGTGCG GTTCCAGTTC GGGATCAGGG TCGGCGGTGT CGGCTAATCT CTGCGCCGTG GCAGTTGGCA CCGAAACGGA TGGCTCGGTC ATTGCCCCTG CCTCGTTTTG TGGCGTTGTC GGGATTAAAC CAACGGTAGG GCTGGTGAGT CGCAGCGGCA TTATTCCCAT CTCAAAAACG CAGGACACTG CCGGTCCAAT GACCCGAACG GTAACGGATG CGGCTATTTT GCTGGGTGCC ATGACCGGTA TCGATCCGGC GGATGCCGTT ACGACTGAAA GCCAGGGCAA GGCCCTGACC GATTATACCC AGTTTTTACG GGCAGACGGG TTATCAGGCA AACGCATTGG TGTCGAAAAA TCCTTTTTGA AAGGGCACGA AGGTGTTGTT GGGCTGTTCA GGCAAGCTAT TGATGTCTTA AAAAAACAGG GAGCCGTTAT CGTTGAGGTT GAGTTGCTCA ACCAGTTCAG TTCCATTGGC GGGGCGGAGT TTACGGTACT CCAGTACGAA TTTAAAGATG GCGTAAACCA ATACCTGGCA TCGGCCAATG CGGGTGTTAA ATCGCTGGCC GAGGTCATTG CCTACAATCG CAAAAATGAA GCGAAAGCCA TGCCTTTCTT CAAACAGGAA ACCCTCGAAA GCAGCGAGGC CAAGGGTGGG TTAAGCAGTA AAGAATATAC AGATGCGCTG GCTAAAACCC GAACGTCACG ACAATTGATC GACAAACTAA TGGCCTCCGC TAAACTGGAT GCCATTTGTG GTACCAGCAT TGGTTTTGCG GGCTGTATCG ACCTGATAAA TGGCGACTAC GACACCGGCT TCTATTTCTG TCCGCCAGCA GCTATGGCCG GGTATCCGCA CATTACGGTT CCGATGGGCA CGGTACATGG GCTTCCTGTT GGCCTTTCTT TTATAGCCAG CGCCTACCAG GAAGGCCCCC TCCTCAGCAT TGGCTATGCC TATGAACAAG CCTCGAAAAA ACGAATTCGC CCCCCGTTTA CCAAATCGCT GATTCCAGGC TGA
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Protein sequence | MNRRSFIKNS SVVSLSASTL TVAACSSPKQ ASTEKDSAAF TDDFELNEVT IGDLQKKMQS GQYTAAAITQ LYLDRIKVID KQGPSLNSVI ELNPDALSIA NAMDQERKAG KLRGPLHGIP ILIKDNIDTG DQMMTTAGAL ALDGHKAAKD AFVAKKLRDA GAIILGKTNL SEWANFRSTR SSSGWSSRGG QTRNPFVLDR SPCGSSSGSG SAVSANLCAV AVGTETDGSV IAPASFCGVV GIKPTVGLVS RSGIIPISKT QDTAGPMTRT VTDAAILLGA MTGIDPADAV TTESQGKALT DYTQFLRADG LSGKRIGVEK SFLKGHEGVV GLFRQAIDVL KKQGAVIVEV ELLNQFSSIG GAEFTVLQYE FKDGVNQYLA SANAGVKSLA EVIAYNRKNE AKAMPFFKQE TLESSEAKGG LSSKEYTDAL AKTRTSRQLI DKLMASAKLD AICGTSIGFA GCIDLINGDY DTGFYFCPPA AMAGYPHITV PMGTVHGLPV GLSFIASAYQ EGPLLSIGYA YEQASKKRIR PPFTKSLIPG
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