Gene Slin_3845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3845 
Symbol 
ID8727603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4613910 
End bp4614737 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content48% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003388634 
Protein GI284038704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGT ACTTCCTAAT CCTGGCCCTG ATTTTCCTGA CGAGTTCGTT TACCCGTAAA 
GAGCTTGCCT GGGTAGCCAT TGGCGACTCG ATCACCTATT TAAACGAGCA TCTGGACGAA
ACAGGCAATC GAATTACCAA AGGCTACATG ACTCGTGTAA CAGAACAGTT GCCGCATGTA
CATTACGTAA ATCAGGGGCA TAACGGCTGG ACAGCGGGCA AGATAGCGTC TTCGATTGAA
ACCCTGGGGC TCGTTAAAGC CGACCTCTAT TCGGTCTTTC TGGGAACAAA CGACTGGTGG
GCTGGCCGAC CCCTGGGCAC CCTGGCCGAT TACCAGCGCG GCACCGGCAA TGCAACGGTA
TATGGCTCAT TCCGCATCAT TATCAACAAA CTCCGCAACC TCAATCCACA GGCTCCAATC
ATTCTGATTA CGCCCATGCA GCGCGTGGAT TTCGTCTACC TGACCAATTT CAAGAACAAT
GCTTATGGCT CGTATAAGCC CAAAAATGGG CAATGGCTCG AATCGTTTGC CAACGCCATT
GATTCGATTG GCCACTACGA ACACTTGCCG GTTGTTGACC TATACCATAC GAAAGGGTTA
CAGATGAAAA ACCTGGTCAA ATACAAACGG TTGAAAGATC CCCAGACGGG AGCATACACC
AACTATGCCT ATCCGAAATT CATCGATATA CCGTTCAACC CGGAAACGGA TGAATATCCT
TACCCGACTG ATGCTATCGA TAAAACTTAT GATGGACTTC ACCCATCCGA TGCCGGTTAC
TCACTGATTA GCCGTAAGTT GGTAAAGATT ATCAGGCAAT ACCGTTAA
 
Protein sequence
MNKYFLILAL IFLTSSFTRK ELAWVAIGDS ITYLNEHLDE TGNRITKGYM TRVTEQLPHV 
HYVNQGHNGW TAGKIASSIE TLGLVKADLY SVFLGTNDWW AGRPLGTLAD YQRGTGNATV
YGSFRIIINK LRNLNPQAPI ILITPMQRVD FVYLTNFKNN AYGSYKPKNG QWLESFANAI
DSIGHYEHLP VVDLYHTKGL QMKNLVKYKR LKDPQTGAYT NYAYPKFIDI PFNPETDEYP
YPTDAIDKTY DGLHPSDAGY SLISRKLVKI IRQYR