Gene Slin_3821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3821 
Symbol 
ID8727579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4590913 
End bp4592034 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388612 
Protein GI284038682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA AATCCCACTT TGACCTAAGC CAGGCCACCC AAACTTGGCT TAGTCAACTC 
GAACAACGGG GCACCTTCAC CAAAGACGAC CTTCGGGAAT TGCAAAGCCA TTTATTAGAT
GGCATGGACG CCTTACAAGC CACGGGACTA AGTCAGCAAG AGGCTTTTCT AGTGGCGACC
CACCGGGTAG GACCCCTGGA CGTTTTGGCC GAGGAATTCG GTAAATTAGA TCGGCCCGCA
CAGCCTCAAC GGGAATCAGT ACTGCTGCTG TTGGGTGTAA TCAGTTTTAT GCTAGTCAAA
AATACCGTTG AGATGGTGAG TGAGTGTGGG GCTGTGGCAT TAGCTCGCTA TTTGGGCGAC
TCGTTCCTAA CGTCGCTACT GGACATGAGC TTATCACTCC TGTTGCTATG TAGTCTCTCG
GTCGGCGTGA GTCGTTGGTT CAACGAGAGC GGACTGGTAC GATCTTGGTT GTTTACTCAG
CTCAATCAAC GCCCCATCCG ATTAATAATA GGAATGACGG TCTTGCTGGG CGGCTCCGCT
TTAGGAGCTT ACCTCGGCCA CCATCAATTC GAAGCGTTGG TCACCAAAAC GAGCACAGAG
CGGTGGACCC ACAGCGAGTT TGGTCATGTT CATGGGCTTT TTTGGCTTGG CTTCTATTTA
GTCTGGTTGT TGATGCTTTT CCAAGTGGCG ATAGGCTATC TATCAGCGGG AAGTCAAACC
TTGCTTACTT GGTTAAGGCA AGCGTCCCTT GGTTGGCTTC TTGTAGCTGG ACTTGGCCTG
TTTAGTTGCT GTTTAGGCAT TAGTATCATG GGGATGCGAA TCCTGGCTCC GGTTGATGGA
ACCCCCCACT TCTACGTAAG CGCAGGACTA AGTGGCCTGC TCAGTGCCCT GGTACTTAGC
CGGTCGCTAC ACTATTCGTT TTTAACTCGA TTACTGGTCA GTGTTACACC CTTATTGATT
TGGTATCTTC TTGCCTTAGG AACTACCGTG CCCTTCGAAG AAAAGCCCTC CCGTTTGCTG
GAAGACTTGT TCCCAGTAAA ATTTATTATT TCCGGTCTGG TGGGCGGATT AATAGGGTTG
TTTTTAGGCA GTCTGTCGAA TCGGCGTCCG GTTTCCATCT GA
 
Protein sequence
MDHKSHFDLS QATQTWLSQL EQRGTFTKDD LRELQSHLLD GMDALQATGL SQQEAFLVAT 
HRVGPLDVLA EEFGKLDRPA QPQRESVLLL LGVISFMLVK NTVEMVSECG AVALARYLGD
SFLTSLLDMS LSLLLLCSLS VGVSRWFNES GLVRSWLFTQ LNQRPIRLII GMTVLLGGSA
LGAYLGHHQF EALVTKTSTE RWTHSEFGHV HGLFWLGFYL VWLLMLFQVA IGYLSAGSQT
LLTWLRQASL GWLLVAGLGL FSCCLGISIM GMRILAPVDG TPHFYVSAGL SGLLSALVLS
RSLHYSFLTR LLVSVTPLLI WYLLALGTTV PFEEKPSRLL EDLFPVKFII SGLVGGLIGL
FLGSLSNRRP VSI