Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3820 |
Symbol | |
ID | 8727578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4587925 |
End bp | 4590570 |
Gene Length | 2646 bp |
Protein Length | 881 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003388611 |
Protein GI | 284038681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCC AGCAACAGCC TTCCGATACG CCTGCTAATC TGACCCAGCG ACTTAATATC GACTTTGCCC TTCAAGCTGC CGGTCTGGGC GTCTGGGAAC TGGACCCGGT TACTAAACAA GTGCTCTGGG ATGATCGATG CCGTCTGTTA TTTGGCCTGA CCAAAGACAA TCAGCTCCCC TTTGAACAAG CCATCCAGTA TATCCATCCC GACGATCAGG CCCGCATAGA TCAGGCCGTT CAACAGGCGC TCTTGGGCCA GTCGAACGGG CAGTATGATG TGACCTATCG AACGGTGGGG GCCGATGATG GCCTGCTCCG GTGGGTACGG TTCATGGGTA GGGCCGAGTT GACCCCTGCC GGGCAGGTCT GCCGGTTTGC GGGCGTGGCG CAGGAGGTCA CCCCACAGGT GCTGGCTCAG CAGCAGGTAC AGCAGGCTCA AGACACCTTG CAGGGCGTGC TGGCCATTGC CGATACGGGC ATCTGGACCT TGGATGTGGC TACGGGACTA ATTTCGTATT CGCAACGGCT TAAAGAACTC TTTGAATTTA CCGATGATAC CATCGGGATG GACCGCGTCT ATAATCCCAT TCTTGACGCA GATCAACTAC GGGTGGCTCA GGCGGTGAAC CGAGCCCTTG ACCCGGCCTC CGGTGGCCTC CTGGATGAAG AGTATTCGAT CGTGACCCAG CGCACGGGGC GACACCGGAT TGTTCGGGCC CAGGCCAAAC TGTATGTTGA TGAGCAGGGG ACCCACAAGC TCCAGGGTAG CATGCGCGAC GTGACGCAGG AGCGCGATAC GCAACTGGCC CTGGAGCAGC AGGTGCAGGC CCGCACCCAG CAGCTGGAAG CCAGCGAAGC CCGCTATCGT CAATTAGCCC AAAGTTTGGA AGCCCAGGTG CACCAACGGA CCCAAGCGCT GGTAACCGCC AATGAGGAAC TAGCCGCCAT TAATGAAGAA CTCCGAATCA GTTATGAACA GGAGCGGCTA GTTCGTCAGC AGTTGGAAAA CAGTGAAGCT CGTTTTCGTT CCCTTATTGA AGAAGCCCCC ATCGCCACCT GTTTGTTGGT GGGGCGCGAG CTACGCACTG AAGTAGCTAA CCAACCCATG CTTGACCTTT TTGGCAAAGG CCGGTCGATG TTTGATAAGC CCTTAAGCGA GGCCATGCCC GAATTGGCCG GTCAGCCGTT CCTTGACATC CTGGATGAGG TCTTCACCAC CGGTATCGCC TATGAGGCGA AGGGCATTCG GGCGGATGTC GAAGTGGATG GGGTACTGGG TAGCTACTAT TTTGACTTTA CCTACAAGCC TTTGCGGAAT GCCAAAGGGA GCGTGTACGC CATCATCGAC ATGGCCATTG ATGTAACCCA GCAAGTGCTG GCCCGCCAAG AATCCGAAGC CACCCTCCGT CAGTTTCGCA CCTTACTCCA GGCCCTTCCC AATATGACTT GGACTAACAC GCCTACCGGC GAAGTGGACT TCTACAACGA GCGCTGGTAC GCCTATACGG GGTTGAGTTT GGAGCAAACC CGCGACTGGG GCTGGCAGGC GGTTGTCCAT CCCGATGATT TGCCCCAGAC GATGGCCACC TACCAGCAGG CGCTGGCGAG GGGTGAAGAA TTTATGTTTG AGAACCGGTA TCGGCGGGCC GATGGGCAGT ACCGCTGGCA CCTGAATCGG GCCTTACCAC TCTACGGTGA GGATGGTCAG CTGGTCAACT GGGTAGGCAC CGCGACCGAT ATCCATGAAC AGAAGCAAGT AGAAGCCCAA CTCGAACAGC AGGTGCAGGA ACGCACCGAG CAGTTAGCCG CCAGTAATGA AGAACTGTCG GCTACGAATG AAGAGTTAAC GGCAACCAAC AAGGATTTCA TCGCTGCCAA CCAGGCACTG GAAGGCGCCA ACCATGACCT GTTGCGCTCG AATAAGAACC TGGAGCAGTT TGCCTACATT GCCTCCCATG ACATGCAGGA ACCCCTGCGT AAGATTCAGC AGTTTGGTGA TCTGCTCAAG AGTCAGTACG GGGACCGGCT GGGCGATGGC GTTGCTTACT TAGAGCGGAT GCAGACCGCA GCCAGTCGCA TGTCGGCGTT GATTCGAGAC TTGTTAGCCT TCTCGCGGAT CTCCACCACG CAGGTGATTG CCCAACCTGT AGCACTGGAT CAAGTGGTGA GCCGGGTGTT AGAGACCTTA TCGGTCGTAG TGGAGGAAAG TGGAGCCCAG GTGGAGGTGA CTAGCTTGCC GGTGGTGCCG GGGGATCGCT CCCAGTTGGA CCAACTGTTT CAGAACCTGT TGTCCAACGC GGTCAAGTTT CGGCGTACCA GCCCAGGCGG GGAGCTGGTT ACCCCTCAAA TTCGCATCAA GGCTAATCTA GTCGCCGAAA GCGACCTACC CCCTTCCCTA CATCCTGCCC GATACGCCCA AACCTATCAC TGCATTGAAG TAGCGGACAA CGGTATTGGC TTCGAGGAGA AGTATCTGGA CCGCATGTTT GAGGTGTTTC AGCGGTTGCA TGGCAAGAAC GAGTTTGGGG GTACGGGTAT CGGGTTGGCC ATTGTGCAGA AGGTGGTGAT CAATCATGGG GGAGCTATCA CCGCTACGAG TGAGCCCGGC CAGGGAGCCA CCTTCTTGGT GTACTTGCCC GCCTAG
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Protein sequence | MTGQQQPSDT PANLTQRLNI DFALQAAGLG VWELDPVTKQ VLWDDRCRLL FGLTKDNQLP FEQAIQYIHP DDQARIDQAV QQALLGQSNG QYDVTYRTVG ADDGLLRWVR FMGRAELTPA GQVCRFAGVA QEVTPQVLAQ QQVQQAQDTL QGVLAIADTG IWTLDVATGL ISYSQRLKEL FEFTDDTIGM DRVYNPILDA DQLRVAQAVN RALDPASGGL LDEEYSIVTQ RTGRHRIVRA QAKLYVDEQG THKLQGSMRD VTQERDTQLA LEQQVQARTQ QLEASEARYR QLAQSLEAQV HQRTQALVTA NEELAAINEE LRISYEQERL VRQQLENSEA RFRSLIEEAP IATCLLVGRE LRTEVANQPM LDLFGKGRSM FDKPLSEAMP ELAGQPFLDI LDEVFTTGIA YEAKGIRADV EVDGVLGSYY FDFTYKPLRN AKGSVYAIID MAIDVTQQVL ARQESEATLR QFRTLLQALP NMTWTNTPTG EVDFYNERWY AYTGLSLEQT RDWGWQAVVH PDDLPQTMAT YQQALARGEE FMFENRYRRA DGQYRWHLNR ALPLYGEDGQ LVNWVGTATD IHEQKQVEAQ LEQQVQERTE QLAASNEELS ATNEELTATN KDFIAANQAL EGANHDLLRS NKNLEQFAYI ASHDMQEPLR KIQQFGDLLK SQYGDRLGDG VAYLERMQTA ASRMSALIRD LLAFSRISTT QVIAQPVALD QVVSRVLETL SVVVEESGAQ VEVTSLPVVP GDRSQLDQLF QNLLSNAVKF RRTSPGGELV TPQIRIKANL VAESDLPPSL HPARYAQTYH CIEVADNGIG FEEKYLDRMF EVFQRLHGKN EFGGTGIGLA IVQKVVINHG GAITATSEPG QGATFLVYLP A
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