Gene Slin_3811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3811 
Symbol 
ID8727569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4580178 
End bp4580771 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content47% 
IMG OID 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003388603 
Protein GI284038673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000424925 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.837205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCC CGCTGATTCA CTACATACAG GAACACGCCA CTTTCCCCCT TTCCGAAACC 
GATATCAGCC TGCTGGAGGA AGCGTTCATC CCCAAAAAAT TAAGAAAGCG GCAATTCCTG
CTACAGGAAG GTGAAGTCTG TAAATACATC GCCTTCATTG TGAAGGGAGC CACCCGGCAA
TATACGGTCG ACGAAAAAGG GTATGAGCAC GTGCTCAATT TATGCATCGA AAACTGGTGG
ACGTCGGATC GGGAGAGCTT TCACAAAGAA ACACCGTCTA TTTACAACAT CGATGCCTGG
GAAGAAACCG AGTTACTCTT ACTGCCAAAA GCAAATGGCT ATTACGAACG CGTTAATATC
ATTCCGGCCT TCAACGAAAT GCGGATAAAG CTGGATGATA ACCAGCACAT GGCTGTTCAA
AAACGCCTGA ACATGGCCCA AAACTACACG GCCGATTACC GCTATGAAGA GTTGACTAAA
CTATATCCCG AATTCCTGCA GCGTTTTCCC CAGCATATTA TCGCATCTTA CCTGGGTATA
ACCAAAGAAA CGCTGAGCCG CATTCGCCAT CAACACCTGA AAAAAGCAAG CTGA
 
Protein sequence
MITPLIHYIQ EHATFPLSET DISLLEEAFI PKKLRKRQFL LQEGEVCKYI AFIVKGATRQ 
YTVDEKGYEH VLNLCIENWW TSDRESFHKE TPSIYNIDAW EETELLLLPK ANGYYERVNI
IPAFNEMRIK LDDNQHMAVQ KRLNMAQNYT ADYRYEELTK LYPEFLQRFP QHIIASYLGI
TKETLSRIRH QHLKKAS