Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3801 |
Symbol | |
ID | 8727559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4568471 |
End bp | 4571983 |
Gene Length | 3513 bp |
Protein Length | 1170 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | Ig family protein |
Protein accession | YP_003388593 |
Protein GI | 284038663 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000269985 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.432666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA ACTTTACCCG GTTTCGTATG AAGAATTCCG CTCACCTCTC CGCCTGTCTG CTGGGAGTGG CCCTGTGGCT GATGAGCGCC CTGAGTCTGC GGGCTCAAAC GGTGTATGTT ACCCAAGAGG GAGCCGGTCA GCAAAGCGGT GCCGACTGGG CCAACGCCCT GCCCGGCAGT CAACTCCAGG CTACCCTGGC CTCGGCCTCC GAAGGAGCTG AGTTTCGATT GGCGGGAGGA ACCTACAAGC CCAGCCAGAC GGGTGATCGT GGCTTAACCT TTACTATCCC TTCGGGGGTA AAGGTGCTGG GGGGTTATCT GGGCAACGGT GCCAATCCCG ACCAGCGTAT AGACTTTGCC AGTACCGACC AGCCCAGCAG CACAACCCTC TCAGGTGATA TTGATAACAA CAACCAGTTG GATGCGGGGA ACAGCGAACA CGTCGTTAAT TTTAACAAGG CCAGTGAGCA GACCCGTCTG GATGGTGTGG TCATTACAGG AGGAAATGCG ACCAACGGTG GTGGAGGAAT CTACAACAAT GGCAATCGAG GAGTCAGCAG TCCAACTATT CAGAATTGTG TAGTAAGTCA GAATCGTACG AATGGGAAGG GCGGAGCCAT CTTAAACGAT GGAAGTTCGG GCCAGGCCAA TCCCGTGCTT ATTAATTGCC GCTTCGTCAG TAATCAGGCC AATCAGGGAG GAGCTATTTA CAATGACGCG TTTCTGGGCA CCTGTAAGCC TACTTTCACG AATTGCTCCT TTCTGAACAA CTCAGCCAGC AATGGCGGAG CGATATACGA TTATGCCGAA GCGAATGGTC CGTTTGGCCC CCCTGGTCCA GGTGACAATC GTCCTCTTCT GGTAAACTGT GTGTTACAGG CAAATACCGC TTCTGCCACT GGTGGCGCCA TGGTTAATGA AACCAGAGGA GCCGGTCTTC CAACCACTGA GCCAACCCTG ATCAACTGTA GCCTGGTGAG TAATTCGGCC CCCCAGGGAG GGGCTTTTTA TAACATTGCC ACGCCGAATA CAATTAATAA TACCCAAATA TTTGCCAAGC CCAGGTTGTA CAATAGCTTC TTATGGAACA ACGGGGGGGG CAATACCACG GTAAACATCA AGTTTAAGAA CAACTCCGGT GGAACCAGTA GCGGAGAAGG GCAGATTCTA TTTTATAACT GTCTGGGCGA TCCGGGGGTG AATAACGCCC TGAACACGGA CCCCAAAGCC CAAATCATCA CCACATCCCC GTTTGTGAGC GCGTCGAACT TACAGCTCAA TCCCTGCTCC CCGGCCATTA ACACCGGCAA CACCAGCTAC TACACCGACC GATCGAGCCA GCAAACAGAC CTGGCCGGTA ACCCCCGGAT GGTGGGTGCC ACCATCGACA TCGGTGCCTT CGAGTTCCAA GGCACGCCTG CTATCCCCCT GGCCATCACC CAGCCACCCG CCAGTCAGTC CAGCGTCGTG GCCGGTGCGA CCGTCGAGAC AACCGTCGGC CTCAATGCAC CGGCCGACAG CTACACATGG TACAAAGACG GAATCGTCGT GACGGGGCAG ACCTCAGGTA GCCTCCGGCT CACTAATGTG CAACTCGCTC AGGCGGGTTC CTACTCGCTG GTGGCCACCA GTGCCTGCAA CAGCGTTACC TCCACCGCCT TTAGCCTCTC CGTTACCCTG TCACGGCTCA TCACCCTCAG TGGCCTCTCG GTCAGTCCCA ATCCCGTCTG TGCGGGCCAG TCTATCTCGG TGGAGGCCAG CGTTGGCAAC CTCAGTGGCA GCTACAGCTA CACGCTCACC AATGGGATCA ACCCCATCAG CGGCACGGCC ACCACCTCAG CCTTCAGTCA GTCGCTGACG GCCACAGGCT CAGGGGTGCA GAGCTTCACC CTGACGGTGA GCAGCGGTGA ACAAGTAGCC ACGGCCACGA CCAGCTTAAC CGTCAATGCG CCCCCCAGCC CGACGCTCAT CAGCAGTGGT ACCTTAAGTT GTGGGCAGAC TTCCCTCACC CTGACAGCCA GTCCGGGTGA GCAGAGCTAC CGCTTTAGTG GTCCCAGTGT GGTGAGCCAG AGTGGCAACA CGGCCCTCGT CAACGCACCG GGCACCTACT CGGTGACCAG CACGAATGCC AGTGGGTGCG TGAGTACGAC CAGCACGACC GTCTTCAGCA ACACGGCGGT GATCACCATG AATAATCCCC CTACCAGCAC TGCAACCCTC AATGCGCCCT TCAGCCAAAC CTTAACGGCC ACGGGTGGGG CAACGCCCTA CTTCTACAGC CTGGCTAGCG GCAGTCTACC TGCCGGACTG AGTTTGACCC CAAGTGGTCT GCTCAGCGGC ACGCCAACCC AGGCCGGCAG TTTCACCCTG GTAGTGCGGG GCCAGGACGC CAATGGCTGT TTCGGTCTGG GACCTGCCTA CGTCTTGACG GTTAATGCTA CGGCTGTCAT CAGCGGCTTT ACTTCGCTGG AGAACACGGT CTGCGTGGGC AGTCCGGTAA CCTTTACCGC CACCGTGGGT AACGTAACGG CCCCCTACAC GTATACGCTT ACCAATGGCA CCAGCACCAC CACTGGCACA ACCAGTGGTG GTTTCAGCCA GCACCTGACG GCCACAGGCT CGGGGGCGCA GAGCTTCACC CTGACGGTGA GCAGCGGTGA ACAAGTAGCC ACGGCCACGA CCAGTGTGAC GGTGATGCCT ACGCCACCAA CACCCACCAT CGCTACGCAG AGTGGGCAGT CCTACCCCGG TGGTCAATCG GCCCTCACCG TGGCTCAGTA CTCGGGTACG GTCACCCTGC TCATCAACGG CTGTAGCGGT ACCATCAACT GGCAGGGGCC CAATGGCAGC AGCGGCAGCA CCACCAGTAT CCCGGTAGCG ACCTCCGCCA CCGGTACGTT TGTCTACCAG GCTACCTGTC AGCAAACGGG CTGCTTGAGT GCGCCCGCCA GCGCTACAGT CACCGTGCAG GGCGCACCCC TGCGGGTGAT CACTCCGCTG TTCGACTGTG CCAGCGGCAA ACTGACCCTG CGCACCACAG GTGGTAACGG CCAGCCCATT GAGTACCAGA TTCCCTCGGT GACCACTGGC TGGGAAGCTA CCAACCCGGT GAGCATCCAG GCCAAAGATT TCAAAAAGAG CCTCAAGCTA CGGGCTCGTC AGCGAAGCGT GGGTAAGGGC GGCTTTGAGA GTGACGAGCT GGACTACCAG TTACCGGCCT GTCCGGGAGC CCGTGTAGCT TCGCCAGAAA CAGACACTGA GCTGAGGGTG GTGGTTCTGG ACAATCCCAT AACGGGTCAG GCAGTGGTGG TAGAGGTGCG GGGTGCCGAA GGCCAACCCT TGCGATTGGC CTTAACTAAT TTACAGGGTC AACCGATCAG CGAGAAGACC CTAGAACAGG CCAGGGGAGT AGAGACTCAA AGCTTATCCG TAGGTTCCCA GGGGGCAGGT GTGCTGTTGT TGCGGGTGAG CACCGCTGGT CAAACGAAGA CGCTCAAAGT GCTTAAGCTC TAA
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Protein sequence | MKNNFTRFRM KNSAHLSACL LGVALWLMSA LSLRAQTVYV TQEGAGQQSG ADWANALPGS QLQATLASAS EGAEFRLAGG TYKPSQTGDR GLTFTIPSGV KVLGGYLGNG ANPDQRIDFA STDQPSSTTL SGDIDNNNQL DAGNSEHVVN FNKASEQTRL DGVVITGGNA TNGGGGIYNN GNRGVSSPTI QNCVVSQNRT NGKGGAILND GSSGQANPVL INCRFVSNQA NQGGAIYNDA FLGTCKPTFT NCSFLNNSAS NGGAIYDYAE ANGPFGPPGP GDNRPLLVNC VLQANTASAT GGAMVNETRG AGLPTTEPTL INCSLVSNSA PQGGAFYNIA TPNTINNTQI FAKPRLYNSF LWNNGGGNTT VNIKFKNNSG GTSSGEGQIL FYNCLGDPGV NNALNTDPKA QIITTSPFVS ASNLQLNPCS PAINTGNTSY YTDRSSQQTD LAGNPRMVGA TIDIGAFEFQ GTPAIPLAIT QPPASQSSVV AGATVETTVG LNAPADSYTW YKDGIVVTGQ TSGSLRLTNV QLAQAGSYSL VATSACNSVT STAFSLSVTL SRLITLSGLS VSPNPVCAGQ SISVEASVGN LSGSYSYTLT NGINPISGTA TTSAFSQSLT ATGSGVQSFT LTVSSGEQVA TATTSLTVNA PPSPTLISSG TLSCGQTSLT LTASPGEQSY RFSGPSVVSQ SGNTALVNAP GTYSVTSTNA SGCVSTTSTT VFSNTAVITM NNPPTSTATL NAPFSQTLTA TGGATPYFYS LASGSLPAGL SLTPSGLLSG TPTQAGSFTL VVRGQDANGC FGLGPAYVLT VNATAVISGF TSLENTVCVG SPVTFTATVG NVTAPYTYTL TNGTSTTTGT TSGGFSQHLT ATGSGAQSFT LTVSSGEQVA TATTSVTVMP TPPTPTIATQ SGQSYPGGQS ALTVAQYSGT VTLLINGCSG TINWQGPNGS SGSTTSIPVA TSATGTFVYQ ATCQQTGCLS APASATVTVQ GAPLRVITPL FDCASGKLTL RTTGGNGQPI EYQIPSVTTG WEATNPVSIQ AKDFKKSLKL RARQRSVGKG GFESDELDYQ LPACPGARVA SPETDTELRV VVLDNPITGQ AVVVEVRGAE GQPLRLALTN LQGQPISEKT LEQARGVETQ SLSVGSQGAG VLLLRVSTAG QTKTLKVLKL
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