Gene Slin_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3781 
Symbol 
ID8727539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4545649 
End bp4546311 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388575 
Protein GI284038645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.656806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.14797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGAC AAGATAGCCT CCAAACAACG TTTGACCATT TAATTTTTGG TTCCTACTTC 
CTGGAAGACG GCGTTAACTT TATTGCTGAA CAACTGGGCG TTCGGCCTCA GCCAGGTGGG
CAACACCTGA CCATGGGCAC GCATAACGCT GTGCTTAAAC TGGCCGATAC CACGTATCTG
GAAGTCATTG CCATTGATCC GTCCCTGCCC AGGCCACCAA GGCCCCGCTG GTTTGGGATG
GACAACCTGC AACCGGGCAG CCCGCCCCAA TTACTAACCT GGGTGGTTCG AACCACCGAC
ATTCAGCAAG CCGTACGCCA GTCAAGATGG CAGCATGGCA CGATTGAGTC GCTCCAACGG
GGTATGTATC ACTGGCAGAT TGCTATTGCC GAAGACGGTC AACTGCCCAT GCAGGGCCTT
GCGCCAACCG TCATCCAATG GGCAGGTGAC GCACACCCCG CGTACGGGTT ATCCCCTTCG
GATGTAACCC TGACGGCTAT AGAAGCCCGC CATCCAGACG CAGCCGAACT GAACGCCTGG
TTAACCGAAA TAGGTTACGA TGGCCCTTTC ACCGCCAATA CCATAAGCAC CGGGGAAAGC
TGTCGGTTGA CAGTGACCCT GGCGTCAGCC AAAGGGATAG TCAGCTTTGA ATCACTTGGT
TAA
 
Protein sequence
MTRQDSLQTT FDHLIFGSYF LEDGVNFIAE QLGVRPQPGG QHLTMGTHNA VLKLADTTYL 
EVIAIDPSLP RPPRPRWFGM DNLQPGSPPQ LLTWVVRTTD IQQAVRQSRW QHGTIESLQR
GMYHWQIAIA EDGQLPMQGL APTVIQWAGD AHPAYGLSPS DVTLTAIEAR HPDAAELNAW
LTEIGYDGPF TANTISTGES CRLTVTLASA KGIVSFESLG