Gene Slin_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3776 
Symbol 
ID8727534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4541528 
End bp4542586 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content56% 
IMG OID 
Productamine oxidase 
Protein accessionYP_003388570 
Protein GI284038640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.435082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG AACGTAACTG TATATTGATT GGGGGTGGAC TCAGTGGCCT TGCCCTCGCT 
TATCTACTGA CTAAAGAAGG GGTAGCCACC ACGATTCTGG AAGCCTCTGA CCGACTGGGC
GGGCGCATTC AAACCCTAAC CGGCCCCCTG GGCACGCCCC TGGAGTTAGG GGCTACCTGG
TTTTCAGACG TGCATACCCA CTTACTGGCC CTACTTTCCG AATTAGGCCT TCCTAAATAC
CCACAACACT CGGGTGGGAT AAGTCTTTTT CAAACCAAAT CCTTCGAGCC GCCCCAAGCC
TTCTTTGTTC CGGCGGCCGA CAATCCGTCC TATCGACTGG CCGGTGGTAC CCAGCGGCTC
ATTGACAAAC TGGCCCAAAC GCTACCTCCT CAATCGATCC GGCTCAATAC ACCCGTTCGG
GCGATTAACC AAAGCGGGGA CCTGTTGAGC GTCGAGCTCG CCGATGGGTC CGCCCTGCAA
GCCCATCAGG TTATTTGTTG CCTGCCCCCG CAACTGGCGG CCAGCCGCAT TCAGTTTTCA
CCGGCACTGC CCGAGATGAT CGCCAAGCTG CTACCAACGG TGCAAACCTG GATGGCGGGT
TCAATCAAAT TCGTGCTGGA ATACGATGAG CCGTTTTGGC GACAGGCGGG GTATTCAGGG
ATGCTCTACA GCCACGCGGG CCTGGTGACG GAAATGTATG ACCATACCAA TTTAGAACAG
AATCGGTTCG GCTTCACGGG CTTTTTAAAC GGGAGTGCCG TAGCCTATAG CCCTGAGGTC
CGCCGGGAAT TTGTCCTGCG ACAGCTAGGT GAACTGTTCG GTCCTAAAGC AGCCCAGCCC
AGTGCCTATG TCGATAAAGT GTGGAATGAC GAGTATGTCC TGGCCGGGAG TCCGGTTATC
CTTAGACCGC ATCAGCATAA TGGACACCCG GCGCTTCAGG CGGGCTACAT GGATAACCGG
CTGCATTTTT GTGGCACCGA AACGGCCTCC GCGTTTGGAG GTTATATGGA AGGGGCCGTC
ATGGCTGCCC GCTCGGTTGC CGAGCGAGTG TTGGGATAA
 
Protein sequence
MKTERNCILI GGGLSGLALA YLLTKEGVAT TILEASDRLG GRIQTLTGPL GTPLELGATW 
FSDVHTHLLA LLSELGLPKY PQHSGGISLF QTKSFEPPQA FFVPAADNPS YRLAGGTQRL
IDKLAQTLPP QSIRLNTPVR AINQSGDLLS VELADGSALQ AHQVICCLPP QLAASRIQFS
PALPEMIAKL LPTVQTWMAG SIKFVLEYDE PFWRQAGYSG MLYSHAGLVT EMYDHTNLEQ
NRFGFTGFLN GSAVAYSPEV RREFVLRQLG ELFGPKAAQP SAYVDKVWND EYVLAGSPVI
LRPHQHNGHP ALQAGYMDNR LHFCGTETAS AFGGYMEGAV MAARSVAERV LG