Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3756 |
Symbol | |
ID | 8727514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4520280 |
End bp | 4521137 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003388551 |
Protein GI | 284038621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.295664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCTTAA CTGCCCACAT ACCTCAATAT GGCCTTAGCC CTGAAGCCCA CAAGGGTATA CTGATCGCCA ATCTTAATCA GCATGGTCGT TATATCCGAC ATACTATAGG AATCCCCCAT CGGGATGATC ACTTTACCCT GCTGCTACTT ACATCGGGCT CTTTTAAGGT CAAGATTGAC TTCGAACCGG TTACTATCAA CTACCCCGCC ATCCTCGTTG TCAGACCCGA GCAGGTCCAT CAGGTAGAGG CCATCGCCGA CGCTACGGGT TGGCTGCTCA ATATTGACCC CAGACTTTTA CCCGCTGACA TCATTGATCC CTTGTATACC TATGCTACCG GGGTCATCCC GGTTGACCAG GATGCACCCA CCACGCATCA ACTAGCAGGG GTACTGCAGG CTATAGACTC ACTGGTAGCC ATCAATAGAG ATGTTTTTAG CCAGCGGGCA CTCGTCAGTT TTACGCATGC CCTGTTCAAT CTGGTACTTT CGGTAGCCAG TACGCAACAC CGTTTGACTG AAAAAATTGA TCGAAGCAGC CTCATTTATC AGCAATTCAG GCTGTTACTG GAGGTCCACT ACACCGAATG GAAAAGCCCT CACCACTACG CCGATCGCCT TTCACTGTCG CCAGTCTATT TTAATGATAC GATTCGCAAG CGATCGGGCC AGTCGGTATC CTCTCATATT CAGGAACGCA ATGTGCTGGA AGCCAAACGA CTTTTAGTCT ACACCGAGCA TACGGTCAGT GAAGTCAGTC ACCAACTTGG ATACGAAGAT CCCATCTACT TTGGCAAACT CTTTAAAAAG CATACGCAAC TGTCTCCCCT TCAATTCAAG GCTAAATACC GTGAATAG
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Protein sequence | MTLTAHIPQY GLSPEAHKGI LIANLNQHGR YIRHTIGIPH RDDHFTLLLL TSGSFKVKID FEPVTINYPA ILVVRPEQVH QVEAIADATG WLLNIDPRLL PADIIDPLYT YATGVIPVDQ DAPTTHQLAG VLQAIDSLVA INRDVFSQRA LVSFTHALFN LVLSVASTQH RLTEKIDRSS LIYQQFRLLL EVHYTEWKSP HHYADRLSLS PVYFNDTIRK RSGQSVSSHI QERNVLEAKR LLVYTEHTVS EVSHQLGYED PIYFGKLFKK HTQLSPLQFK AKYRE
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