Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3747 |
Symbol | |
ID | 8727505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4511916 |
End bp | 4512677 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | transposase IS4 family protein |
Protein accession | YP_003388542 |
Protein GI | 284038612 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAC AGTTTTCGAA GCTGACCGAC CCTCAATGGG CGGCAATTTC GCCTTTTTTC AATCTAAAAC GCAAGCGAAA ACACGATTTA CGTCAAGTGA TAAACATCAT TTTATGGCTC CTACGAACAG GCTGTCAATG GCGTAATCTA CCCGAGGAAT GGCCAAATTG GCAAGCGATC TACTATTACT TTGAGCAATG GAAACAAGAT GGTACGTTTG AACGGATCAA TTTAGTTTTA AATCAGTTGG ATCGTAAAAG GGTTGGTAAA GAGTCCTATC CTTCCGCATT ATGTATTGAT GCACAGAGTG TTAAACTAAG TCCAATGATT TGTGAATACA GGGGTCTGGA TGCCAACAAA CGAGTCAATG GCCGTAAAAG ACAATTTGTC GTCGATACGC AAGGTCGACT CTGGGTAGCG GATGTTCATG CGGCAAATCA AGCCGAAGGC CCCGCAGCTA TCGTCCTAAT TGGCGATGTT CTTTGGCGTG CAGGCGAACG CTTAAAAAAA GTGTATGGTG ATCAGTCCTA CAACGGTGTT TTTGCCAAGG CATTAGCTGA TTGGGACATC ACTTTTGAAA AAGCATCGCG GGCCGAATCG ACCCGAGGAT TTGTCCCTGT TGCTAAACGC TGGGTAGTCG AACGTACGAT TGCGTGGACA AATTTCTTCC GGCGCATTGT CAAAGATTAC GAATATACCC TATCATCTTC GGCCAATTGG CTTTATTTAG CTAACATTCA ACTAATGCTC CAGCGAATTT GA
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Protein sequence | MTKQFSKLTD PQWAAISPFF NLKRKRKHDL RQVINIILWL LRTGCQWRNL PEEWPNWQAI YYYFEQWKQD GTFERINLVL NQLDRKRVGK ESYPSALCID AQSVKLSPMI CEYRGLDANK RVNGRKRQFV VDTQGRLWVA DVHAANQAEG PAAIVLIGDV LWRAGERLKK VYGDQSYNGV FAKALADWDI TFEKASRAES TRGFVPVAKR WVVERTIAWT NFFRRIVKDY EYTLSSSANW LYLANIQLML QRI
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