Gene Slin_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3744 
Symbol 
ID8727502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4508146 
End bp4508838 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388541 
Protein GI284038611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAGT CAATATTACT GGATGTACAC TTATCTATGA AAAGGATTCT ATTGTGTTGT 
ATTTGCCTGT TAACAATCAA CTTAAATTGC CTTGGCCAAC GTAAAATCGT CTGGGGAGCT
CAGGCCAAAT TAGGTACGTC AACCTATGAG CCAGTTGAAT TAGGTAATAG TCGGGAGTCC
TTACTAACTT ATGGAGCAGG CATCTATGCT GATTTAGCTT TTAGCGCTCA TTTGTCATTC
CGCCCACAAC TAGGCTGGTT ACGTAAGGGG TTTCAGCAAA ACACAAATTT GTACTCAACT
GGTGGACAAC TCATCAAGGT AATCAATACC AAGCTCTCCT ATGATTACCT ACCCTTAGAT
GTAACGTTTG TGTATCGGCT ACGACCAGAT AAGGTTTTAA AACCTTTCCT ACAGATAGGA
GCTCGAGGAA GTGTACTAAT TGATAATCGA GTTAACCTGA CCAGCACAAC CCAACCAGTT
GGCGGGACTC TTGATCTAGA CAATTTTAAG CGAGTAACAG TGGGCGGGTT ACTTGGTATT
GGCGTGGAGT GGAAACGCTT TTCGCTTGGT TTGGAAGCAA ATCGTGACTT AAGCAGTTAT
TTAAACCCTC CCCCAATCAG CTTATTTGAA GACCTCAAAC CGAAGTTTAG GTGGTATGGT
ATCAGTTTAA GTTTTCAATT ACAGAACCCT TAG
 
Protein sequence
MLKSILLDVH LSMKRILLCC ICLLTINLNC LGQRKIVWGA QAKLGTSTYE PVELGNSRES 
LLTYGAGIYA DLAFSAHLSF RPQLGWLRKG FQQNTNLYST GGQLIKVINT KLSYDYLPLD
VTFVYRLRPD KVLKPFLQIG ARGSVLIDNR VNLTSTTQPV GGTLDLDNFK RVTVGGLLGI
GVEWKRFSLG LEANRDLSSY LNPPPISLFE DLKPKFRWYG ISLSFQLQNP