Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3739 |
Symbol | |
ID | 8727497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4504630 |
End bp | 4505382 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003388536 |
Protein GI | 284038606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAG ATTTGACGCA GAAGGTGGCC ATCGTTACCG GCAGCTCAAA GGGTATTGGC GCGGCCATAG CCAAGGAACT TGCCGCCTGT GGCGCGATTG TCATTGTCAC CTATCATTCG GCGGTAAGCG ATGCCGAAGG CGTGGCTAAC GCCATCCGGG AGACAGGCGG ACAGGCCATT GCCCTTCAGG CCGATATGGC CCGGCATGCC GATATTATTG ATTTGTTAAA ACAGGTGAAG GAGCGGTTTG GCAAGCTGGA TGTGCTGGTG AATAATGCTG GGATCGCCCG ATTCGGCCCC ATTGAAGCGG TTACGGAGGA TGATTTTCTG GAACAGTACC GGGTCAATGT GTTAGGTCCC ATGCTGACGA TCCAGGAGTC GTTGAAGTAT TTTCCCAAAA CAGGAGGTAG CATTGTCAAT ATCAGTTCAG TAGGCGGACA GAATCCAGGG CCCTACACCA GTATTTATAC CTCATCGAAG GCGGCCCTGA ACGCCTTAAC CGTTTCTTTA TCCAGAGAAC TGGTGAACCG CCGCATCCGG GTCAATACGG TGGCACCGGG CCCAACTGAT ACCGAAGGGT CAAAGGCGCT GGGACTGGCA GGCAGTGCCA TCGAAAAGGG CATGATTGCC GCTATACCCA TGGGTAGGTT CGGCAAACCG GATGAAATAG CCCCCGCAGT TGCTTTCTTA GCATCGGATA ACGCGGGCTG GATCACGGGT GAAAAAATAG CTGTTTCGGG AGGGATGCGC TAA
|
Protein sequence | MKIDLTQKVA IVTGSSKGIG AAIAKELAAC GAIVIVTYHS AVSDAEGVAN AIRETGGQAI ALQADMARHA DIIDLLKQVK ERFGKLDVLV NNAGIARFGP IEAVTEDDFL EQYRVNVLGP MLTIQESLKY FPKTGGSIVN ISSVGGQNPG PYTSIYTSSK AALNALTVSL SRELVNRRIR VNTVAPGPTD TEGSKALGLA GSAIEKGMIA AIPMGRFGKP DEIAPAVAFL ASDNAGWITG EKIAVSGGMR
|
| |