Gene Slin_3739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3739 
Symbol 
ID8727497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4504630 
End bp4505382 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content54% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003388536 
Protein GI284038606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG ATTTGACGCA GAAGGTGGCC ATCGTTACCG GCAGCTCAAA GGGTATTGGC 
GCGGCCATAG CCAAGGAACT TGCCGCCTGT GGCGCGATTG TCATTGTCAC CTATCATTCG
GCGGTAAGCG ATGCCGAAGG CGTGGCTAAC GCCATCCGGG AGACAGGCGG ACAGGCCATT
GCCCTTCAGG CCGATATGGC CCGGCATGCC GATATTATTG ATTTGTTAAA ACAGGTGAAG
GAGCGGTTTG GCAAGCTGGA TGTGCTGGTG AATAATGCTG GGATCGCCCG ATTCGGCCCC
ATTGAAGCGG TTACGGAGGA TGATTTTCTG GAACAGTACC GGGTCAATGT GTTAGGTCCC
ATGCTGACGA TCCAGGAGTC GTTGAAGTAT TTTCCCAAAA CAGGAGGTAG CATTGTCAAT
ATCAGTTCAG TAGGCGGACA GAATCCAGGG CCCTACACCA GTATTTATAC CTCATCGAAG
GCGGCCCTGA ACGCCTTAAC CGTTTCTTTA TCCAGAGAAC TGGTGAACCG CCGCATCCGG
GTCAATACGG TGGCACCGGG CCCAACTGAT ACCGAAGGGT CAAAGGCGCT GGGACTGGCA
GGCAGTGCCA TCGAAAAGGG CATGATTGCC GCTATACCCA TGGGTAGGTT CGGCAAACCG
GATGAAATAG CCCCCGCAGT TGCTTTCTTA GCATCGGATA ACGCGGGCTG GATCACGGGT
GAAAAAATAG CTGTTTCGGG AGGGATGCGC TAA
 
Protein sequence
MKIDLTQKVA IVTGSSKGIG AAIAKELAAC GAIVIVTYHS AVSDAEGVAN AIRETGGQAI 
ALQADMARHA DIIDLLKQVK ERFGKLDVLV NNAGIARFGP IEAVTEDDFL EQYRVNVLGP
MLTIQESLKY FPKTGGSIVN ISSVGGQNPG PYTSIYTSSK AALNALTVSL SRELVNRRIR
VNTVAPGPTD TEGSKALGLA GSAIEKGMIA AIPMGRFGKP DEIAPAVAFL ASDNAGWITG
EKIAVSGGMR