Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3730 |
Symbol | |
ID | 8727488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4495520 |
End bp | 4498456 |
Gene Length | 2937 bp |
Protein Length | 978 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003388528 |
Protein GI | 284038598 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.208606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCC ATCAACCGCC TTCCGATACG CCTGCTAATC TGACCCAGCG ACTTAATATT GATTTTGCCC TCCAGGCGGC TGGTCTGGGC GTTTGGGAAT TTGACCCGGT TACTAAACAA GTTCGCTGGG ATGACCGATG CCGGCAGTTA TATGGGGTGG CTAAAAACAA TCAGATTACC TATGAGCAAG CCATCCAGTA TATCCATCCC GACGATCAGG CTCGTGTGGA TCAGGCCGTT CAACAGGCGC TCTCGGTTGA GTCGAACGGA CAATATGACG TGACCTACCG AACGGTGGGG GCCGATGATG GCCTGCTCCG CTGGGTTCGG TTCATGGGTA AAGCTGAGTC TACTCCCGCC GGGCGGGTCT ACCGCTTTGC GGGCGTGGCC CAGGAGGTCA CCCAGCAGGT ACTGGCTCGT CAACAACTGG AAGACAGCGA AGCCCGTTTT CGCTCCCTGA TCGAAGAAGC CCCCATCGCC ACCTGTTTGT TTGTGGGACG GGAGCTACGC ATTGACCTAG CCAACCAACC GATGATTGAC ATCTGGGGCA AAGGCCGGTC GGTGTTCGGC AAGCCCTTAA GCGAGGCACT GCCCGAATTA ACCGGACAGC CGTTTTTGGC CATCCTGGAT GAGGTATTCA CTACCGGTAT CGCCTATGAA GCGAAGGCCG CCCGGGCGGA GATAGAAGTG GATGGCGTGA TGGGTAACTA CTATTTTGAC TTCACCTACA AGCCCCAGCG GAATGCCAAT GGGAGCGTCT ATGCCATCAT CGACATGGCC ATTGATGTAA CCGATCAGGT ACTGGCCCGC CAGCAGCTGG AAGCCAGTGA GGCTCGCTAC CGGCTTCTAT CATCTGAATT AGAAACACTG GTGCAACAAC GGACCCAGGA ATTAACGGCC AGTGAAGCCT TTGCCCGTAA CCTATTCCAA AACTCACCCG TGGCCAATCT GGTATTGGTA GGACAGGATA TGATTATCCA AACCATCAAT GAGGGGATGC TCCACATGTT GGGCCGGGAC CAATCCATCA TTGGTCAGCC CTTAATGAGT GCGCTGCCCG AGTTAGAATC CACCCCCCTA CTGGATCGCC TGCGGCAAGT GCTGAAGAGT GGAGAGGTGT ATCATCAACC TGAAGAACAG ATTGATCTGA TCCGCTTTGA GCGGCCCTAT ACGGGCTACT TTCATTACAT TTACACGCCC CTAACCGATG CAACCAGCCA ACGCATGGGT GTGGTGGTGA CCGCTATCGA AGTAACTACT CAGGTGCTGG CCCGCCAGCA CCTTGAGGAG GTGGAGGCCC GGTTGCGCAC CATCATTACC AATCTGCCGT CGGCTACGGT CGTCTTTCGG GGGCGTGAGT TGGTGGTGGA AAGTCCAAGT AAATACTTCA TCGACCTCAT CGACCGGGGG CCCGACGTGG TCGGTAAGCC ACTGGGTGAG CTGATGCCGG AACTGGAGAG CCAGTCGTAC CTCAACATCC TGGACCAGGT CTACACCACC GGCCAGCCTT ACCGGGCTTT TGGGGCGCCG GTTAGTATTC GTCAAGCAGA CGGATCGACC GTACTCGACT ACTTTGATCT GATTTATACT CCTCTCTTCA ACGCGCAGGG TCAGGTGTAT GCCATTCTCA GCGTAGCCAC CAACGTAACC GAGCAAATAA GGGCTCATCA ACAAGTGGAA AGAAGTGAAA CCGCTTTACG CAACGCCGTC GAACTAGCCG AATTGGGCCA CTTTAGCGTC GATGTGGGGA CCAACCTCAT CACCGTATCC CCACGGGTAG CCGACTGGTT TGGCTTTGAT GACGTAGTTG CCGATGCTCA ATCGTTTATC GATGGCGTCG GCCAAAGCGA CCGCCAGCTG GTAGCCACCC GTCTGGCTAA CGCTCTGCAA CCGGGCTCTG ACGGGCGCTA TGATGTAGAA CACTCCGTCA TTCATGCCAA AACGGGTCAC CAGATCATCC TACACGTCTT GGGCCAACTT TACAAGAATG ACGCTGGGCA AGTCCTGCGG CTAGAGGGCA TTTGTCAGGA CATCACTCCT CAACGCGAGC AACAAGCTGT CTTGGAGCAG CAAGTGCAGG AGCGAACCCA AGAGCTAGCC GCGGCTAATG AGGAACTAGC GGCCAGCAAT GAGGAGTTAA GTGCAACCAA CAAGGAGGTT CAGATCGGCA ACCAAGCTCT GGAAACGGCT AACACCGACC TGTTACGCTC GAATCAGAAC CTGGAGCAGT TCGCCTACAT TGCCTCCCAT GACCTGCAGG AGCCGCTGCG TAAGATCCAG CAGTTCGGTG ATCTGCTCAA GAACCAATAC GGCGACCACC TGGGCGATGG CCTGGCTTAC CTGGAGCGTA TGCAGACCGC AGCCAGTCGC ATGTCGGTGT TGATCCGAGA CTTGTTAGCT TTCTCGCGGA TCTCCACCAC GCAGGTGATT GCCCAACCCG TGGGGCTCAA TCAGGTGGTG AGCCGGGTGT TGGACGCCTT ATCGGTCGTG GTGGAGGAAA GTGGGGCGCA GGTGGTTGTG ACTAGCTTGC CGGTAGTGCC GGGGGATCGC TCCCAGTTGG ACCAACTGTT TCAGAACCTG TTGTCCAACG CGGTCAAGTT TCGGCGTACC AACCCACTCG GGGAGCTGGT TACCCCTCAA ATCAGTATTA AGGCCAGTCT GGTAGCCGAA AGCCAACTAC CCCCTTCGGT ACACCCTTCG CGGTATGCCC AAACCTATCA CTGCATCGAG GTAGCCGACA ACGGCATTGG CTTTAAGGAG AAGTATGTGG ACCGCATGTT TCAGGTGTTT CAGCGGTTGC ACGGCAAAAA CGAATTTGCC GGTACAGGCA TCGGGTTGGC CATTGTGCAG AAGGTGGTGA CCAATCACGG GGGGGGCATC ACCGCGACGA GTGAGCCAGG CCAGGGGGCA ACCTTTAGTG TGTACTTACC AGCCTAG
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Protein sequence | MNGHQPPSDT PANLTQRLNI DFALQAAGLG VWEFDPVTKQ VRWDDRCRQL YGVAKNNQIT YEQAIQYIHP DDQARVDQAV QQALSVESNG QYDVTYRTVG ADDGLLRWVR FMGKAESTPA GRVYRFAGVA QEVTQQVLAR QQLEDSEARF RSLIEEAPIA TCLFVGRELR IDLANQPMID IWGKGRSVFG KPLSEALPEL TGQPFLAILD EVFTTGIAYE AKAARAEIEV DGVMGNYYFD FTYKPQRNAN GSVYAIIDMA IDVTDQVLAR QQLEASEARY RLLSSELETL VQQRTQELTA SEAFARNLFQ NSPVANLVLV GQDMIIQTIN EGMLHMLGRD QSIIGQPLMS ALPELESTPL LDRLRQVLKS GEVYHQPEEQ IDLIRFERPY TGYFHYIYTP LTDATSQRMG VVVTAIEVTT QVLARQHLEE VEARLRTIIT NLPSATVVFR GRELVVESPS KYFIDLIDRG PDVVGKPLGE LMPELESQSY LNILDQVYTT GQPYRAFGAP VSIRQADGST VLDYFDLIYT PLFNAQGQVY AILSVATNVT EQIRAHQQVE RSETALRNAV ELAELGHFSV DVGTNLITVS PRVADWFGFD DVVADAQSFI DGVGQSDRQL VATRLANALQ PGSDGRYDVE HSVIHAKTGH QIILHVLGQL YKNDAGQVLR LEGICQDITP QREQQAVLEQ QVQERTQELA AANEELAASN EELSATNKEV QIGNQALETA NTDLLRSNQN LEQFAYIASH DLQEPLRKIQ QFGDLLKNQY GDHLGDGLAY LERMQTAASR MSVLIRDLLA FSRISTTQVI AQPVGLNQVV SRVLDALSVV VEESGAQVVV TSLPVVPGDR SQLDQLFQNL LSNAVKFRRT NPLGELVTPQ ISIKASLVAE SQLPPSVHPS RYAQTYHCIE VADNGIGFKE KYVDRMFQVF QRLHGKNEFA GTGIGLAIVQ KVVTNHGGGI TATSEPGQGA TFSVYLPA
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