Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3714 |
Symbol | |
ID | 8727467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4476060 |
End bp | 4477376 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003388515 |
Protein GI | 284038585 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.248399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000324406 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCTTT CTGCTATATC TTCTCAGTTC CTTAATCGTC ACAGTGAAAT CGTTGAGTTG ATAATCCAAA AAAACTGGCG ACTGACGGCA CTAGGCCCCC TGGAGGAATG GCCGCAAAGT TTACAAACAA CGCTCAGTAT CTGTCTTCAT TCCCGGTTTC CAATTCTGTT TTGGTGGGGA CCCGAGTTCA AAATGATCTA CAATGATGCT TATGCGCCTC TACTGGGCAA TAAACATCCA GCGGCATTTG GTAGCCGGGG TGATCAGGTC TGGGGTGAGG TTTGGGATAG TATTGGACCC AGGCTGACTC AGGTGATGAA GAGTGGCGAA TCAACCTGGT CAGAAAATGA ACGATTTACC ATCAATAGAC ACGGCTTCCT GGAGGAGGGC TACTTTACAT TTTCCTACAG CCCGATCTAC GTCGAATCTG GTAAAATTGG GGGCGTTTTT ACCGTAGTAA CCGAAACAAC CCAAGTCATT CTCGCCCAAC AGCAATTGCG CCTTCAACAC GATCAGATTG AGCAGATAAA CGGTGAATTA GAGTCGAAGA TCCAACAGCG TACCCAGGGA TTGCACGATT CATTGGCTGC TTTGGAGAAG ACCAAACTTG AGCTAGCCCA AGCCCTGCTC CTTGAGCAGG CTCTTAGTAA GCTGAAATCG CAATTTGTGG CCATGGCCTC TCACGAATTT CGTACGCCCC TGACCGTGAT AAAGACGTCG GTGGATTTAG TAGAAAAATA TACCGAGCAC CTGAAGGATC TTCCTATCCA AAAACATTTC GACCGAATAG GCATTGCCAT TAATCATTTA ATAACGACGC TGGAAGATTT TTTACTGATG GGACAACTGG ATGAGGGCCA AACGAAAGTG AAACCATATC CGTTTAATCT GGTGGATGCG GTCAATCAAC TTATCTTAGA TATTGAAGTT CTGGTCAAAC CCAATCAAAG GGTCGAAAGT CAAATCGAGT GTTTTACTTC CATCTATATG GATGCCACAT TGCTACGCAA AATACTGCTA AACCTATTGA TAAATGCTAT AAAATATTCA GGTAGTGATT CGACTATCCG AATCCAAGGT GCGTGTGCTG ATGGCTTATT GACGCTTTCC GTTATTGATC AAGGCATCGG CATAGCCGAA GAGGAGCAGC CCCATATTTT TGAGCGATTC TTTCGAGCGC CCAACGCCAC TACCATAGCA GGAACAGGTT TAGGTTTATA TATTGTGCGT CATTATGTAG GCTTGCTGAA TGGTCAGGTT AGCTTGAGCA GTGAGTTGAA CAAAGGGACT ACTGTCACGC TAACGTTTCC GTGTTAG
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Protein sequence | MALSAISSQF LNRHSEIVEL IIQKNWRLTA LGPLEEWPQS LQTTLSICLH SRFPILFWWG PEFKMIYNDA YAPLLGNKHP AAFGSRGDQV WGEVWDSIGP RLTQVMKSGE STWSENERFT INRHGFLEEG YFTFSYSPIY VESGKIGGVF TVVTETTQVI LAQQQLRLQH DQIEQINGEL ESKIQQRTQG LHDSLAALEK TKLELAQALL LEQALSKLKS QFVAMASHEF RTPLTVIKTS VDLVEKYTEH LKDLPIQKHF DRIGIAINHL ITTLEDFLLM GQLDEGQTKV KPYPFNLVDA VNQLILDIEV LVKPNQRVES QIECFTSIYM DATLLRKILL NLLINAIKYS GSDSTIRIQG ACADGLLTLS VIDQGIGIAE EEQPHIFERF FRAPNATTIA GTGLGLYIVR HYVGLLNGQV SLSSELNKGT TVTLTFPC
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